RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Dnajc6Q80TZ3 938 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 SybuQ8BHS8 665 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Rapgef5Q8C0Q9 814 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Scyl2Q8CFE4 930 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ulbp1Q8HWA3 334 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ints9Q8K114 658 aaKnown RBP9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Pnpt1Q8K1R3 783 aaKnown RBP9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Bzw1Q9CQC6 419 aaKnown RBP9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Rtn3Q9ES97 964 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Cbx8Q9QXV1 362 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Shroom2A2ALU4 1481 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 GckP52792 465 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Il1rapl1P59823 695 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Spag6Q3V0U9 509 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Arhgef1Q61210 920 aaKnown RBP9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tor4aQ8BH02 426 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tspan17Q9D7W4 270 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 MrgbpQ9DAT2 204 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Strn3Q9ERG2 796 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 AI481877A2ALV5 1481 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Neo1P97798 1493 aa9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Msh6P54276 1358 aaKnown RBP9.86□□□□□ -0.83
Ptpre-204ENSMUST00000209979 DgkkE9Q7N4 1118 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gspt2Q149F3 632 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ifit1bl2Q3U687 466 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Lrch2Q3UMG5 773 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Pabpc4Q6PHQ9 660 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Letm2Q7TNU7 480 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gpr139Q80UC8 345 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Slc20a2Q80UP8 656 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 F13a1Q8BH61 732 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Anks1bQ8BIZ1 1259 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tigd4Q8BUZ3 513 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Strip2Q8C9H6 844 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Lsm14bQ8CGC4 385 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 NonoQ99K48 473 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Mtmr7Q9Z2C9 660 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Rapgef6Q5NCJ1 1609 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Axin1O35625 863 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Anks1aP59672 1150 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Krt72Q6IME9 520 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ipo5Q8BKC5 1097 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ankk1Q8BZ25 745 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 HnrnprQ8VHM5 632 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ccdc22Q9JIG7 627 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Cyp2j7A0A140T8U1 504 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Apba1B2RUJ5 842 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ccdc24E9PUW8 296 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ccdc144bE9PVZ3 520 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Sec24cG3X972 1096 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gm4758L7N258 96 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Idh1O88844 414 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Cwf19l1Q8CI33 537 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tpd52l2Q9CYZ2 220 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 IkbipQ9DBZ1 373 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Kcnn1Q9EQR3 537 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Add3Q9QYB5 706 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Top2bQ64511 1612 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Phldb3E9QAF4 648 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Top3aO70157 1003 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Grin1P35438 938 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Foxp1P58462 705 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Coq7P97478 217 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tbc1d9bQ5SVR0 1263 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ppp2r5cQ60996 524 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Tmcc1Q69ZZ6 649 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Krt39Q6IFX4 482 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Cracr2bQ80ZJ8 394 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Lyve1Q8BHC0 318 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 H6pdQ8CFX1 789 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 RecqlQ9Z129 648 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 InsrP15208 1372 aa9.85□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Abcc4E9Q236 1325 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Otud7bB2RUR8 840 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Slc4a1P04919 929 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Myl3P09542 204 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Kcna3P16390 528 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Cav1P49817 178 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Polr2fP61219 127 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Hsdl2Q2TPA8 490 aaKnown RBP9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gm4981Q3ULJ8 291 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 WhammQ571B6 793 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Nlrp4eQ66X19 978 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gramd1bQ80TI0 738 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Rbbp8Q80YR6 893 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Pdlim2Q8R1G6 349 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ushbp1Q8R370 680 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Ube3bQ9ES34 1070 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Rnf4Q9QZS2 194 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Lamc3Q9R0B6 1581 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gm28961A0A087WPA5 222 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gm21858A0A087WQ24 222 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Gbp11A9YVJ5 442 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Akr1b10G5E895 316 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Lig1P37913 916 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 IvlP48997 467 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Pa2g4P50580 394 aaKnown RBP9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Parp3Q3ULW8 533 aa9.84□□□□□ -0.83
Ptpre-204ENSMUST00000209979 Syne3Q4FZC9 975 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms