RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Parp1P11103 1013 aaKnown RBP27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 GclcP97494 637 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Kiaa1468Q148V7 1216 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Psg29Q3URN6 468 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Fbxo10Q7TQF2 950 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Zfp202Q8C879 641 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Anapc4Q91W96 807 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Sh3bgrQ9WUZ7 214 aa27.44■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Rrp1P56183 494 aaKnown RBP27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Nbr1P97432 988 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Gtf3c3Q3TMP1 882 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 AdpgkQ8VDL4 496 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Pcdhb15Q91Y04 786 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Cmtm5Q9D6G9 156 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Tanc1Q0VGY8 1856 aa27.43■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Dapk3O54784 448 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Usp49Q6P9L4 685 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Taok2Q6ZQ29 1240 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Rtp1Q8C8C1 263 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Hnrnpul1Q8VDM6 859 aaKnown RBP27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Bhmt2Q91WS4 363 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Fem1bQ9Z2G0 627 aa27.42■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Celf5D3Z4T1 395 aaKnown RBP27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Hoxa11P31311 313 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Cst8P32766 142 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Nr5a1P33242 462 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Lig1P37913 916 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Mrgprb1Q3UG61 350 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Gm10392Q3V3I3 114 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Prpf4bQ61136 1007 aaKnown RBP27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Madcam1Q61826 405 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Ift122Q6NWV3 1182 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Stard7Q8R1R3 373 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Dusp10Q9ESS0 483 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Lmbr1Q9JIT0 490 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Mctp1E9PV86 951 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Zfp51Q3U4L8 781 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Jakmip3Q5DTN8 844 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Myt1Q8CFC2 1127 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Scrn1Q9CZC8 414 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Kcnh3Q9WVJ0 1095 aa27.41■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Gm5134E9QAB5 671 aa27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Gm10134F6ZQC6 126 aa27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Slc39a2G3X943 309 aa27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Vps53Q8CCB4 832 aa27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Vps16Q920Q4 839 aa27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Mmtag2Q99LX5 260 aaKnown RBP27.4■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Gjd2O54851 321 aa27.39■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Evi5P97366 809 aa27.39■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Hdac4Q6NZM9 1076 aa27.39■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Hook1Q8BIL5 728 aa27.39■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Dcaf8Q8N7N5 591 aa27.39■■□□□ 1.98
Pcf11-205ENSMUST00000208255 Skint7A7XV04 395 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Gm21969J3QJZ1 289 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 AoahO35298 574 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 NfibP97863 570 aaKnown RBP27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Kcnj11Q61743 390 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Micall1Q8BGT6 870 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Rec8Q8C5S7 591 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Cyp2b10P12791 500 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Rgl1Q60695 768 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Kdm4bQ91VY5 1086 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Elp3Q9CZX0 547 aa27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Map3k20Q9ESL4 802 aaKnown RBP27.38■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Ttc6G3UYY4 1857 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Atp8b5A3FIN4 1183 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Morf4l1P60762 362 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Btg1-ps1Q3V0S2 161 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Btg1-ps2Q3V0X0 161 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Krt87Q6IMF0 495 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Clec16aQ80U30 1036 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Adgra1Q8C4G9 578 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 GlyctkQ8QZY2 523 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Ces1Q8VCC2 565 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Ttc8Q8VD72 515 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Dnajc19Q9CQV7 116 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 MsraQ9D6Y7 233 aa27.37■■□□□ 1.97
Pcf11-205ENSMUST00000208255 PhipQ8VDD9 1821 aaKnown RBP27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Ctdspl2Q8BG15 465 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 F11Q91Y47 624 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 LpxnQ99N69 386 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Ccdc88cQ6VGS5 2009 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Map7d1A2AJI0 846 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Cyp4f37Q3V1F1 546 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Hoxa13Q62424 386 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Krt34Q9D646 392 aa27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Add3Q9QYB5 706 aaKnown RBP27.36■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Clec11aO88200 328 aa27.35■■□□□ 1.97
Pcf11-205ENSMUST00000208255 FosP01101 380 aa27.35■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Adamts19P59509 1210 aa27.35■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Eif3j2Q66JS6 263 aa27.35■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Katnbl1Q9CWJ3 299 aa27.35■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Brd9Q3UQU0 596 aaKnown RBP27.34■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Usp17leQ7M764 540 aa27.34■■□□□ 1.97
Pcf11-205ENSMUST00000208255 E4f1Q8CCE9 783 aa27.34■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Usp26Q99MX1 835 aa27.34■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Znhit2Q9QY66 399 aa27.34■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Zscan29E9Q5B4 869 aa27.33■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Nlrx1Q3TL44 975 aa27.33■■□□□ 1.97
Pcf11-205ENSMUST00000208255 Pex1Q5BL07 1284 aa27.33■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms