RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Nuf2Q99P69 463 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Eef1gQ9D8N0 437 aaKnown RBP13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Gm6370A0A0G2JGX9 315 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Gm6309L7N481 315 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Asap3Q5U464 904 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 FcgrtQ61559 365 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Rab20P35295 233 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Kctd1Q5M956 257 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Daam2Q80U19 1115 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Frmd4bQ920B0 1035 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Usp14Q9JMA1 493 aaKnown RBP13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Uhrf1bp1lA2RSJ4 1457 aa13.6□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Akap17bA2A3V1 959 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Xrcc6P23475 608 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Grm1P97772 1199 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Eepd1Q3TGW2 569 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Trim80Q3V061 624 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Dnajc8Q6NZB0 253 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Zfp251Q6PCX8 632 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Adgrl2Q8JZZ7 1487 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Eif3cQ8R1B4 911 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Atp5c1Q91VR2 298 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Rbm43Q99J64 343 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 CenpkQ9ESN5 271 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Foxp1P58462 705 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Nuak1Q641K5 658 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Sap130Q8BIH0 1057 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Tubgcp2Q921G8 905 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Mis12Q9CY25 206 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Kif14L0N7N1 1674 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Gm5936A2BG95 728 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Gm5640A3KG49 728 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Adcy7P51829 1099 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Pnma5Q5DTT8 618 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Asic4Q7TNS7 539 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 CcnyQ8BGU5 341 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 OscarQ8VBT3 265 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Setd3Q91WC0 594 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Ppil4Q9CXG3 492 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Myh6Q02566 1938 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 YwhagP61982 247 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Atp1b3P97370 278 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Washc5Q8C2E7 1159 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Kdm4cQ8VCD7 1054 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Pcdha12Q91Y18 950 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Sugt1Q9CX34 336 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Trim71Q1PSW8 855 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Hip1Q8VD75 1029 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Ces1fQ91WU0 561 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Pdcd11Q6NS46 1862 aaKnown RBP13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Gzf1Q4VBD9 706 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Tpd52Q62393 224 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Krt87Q6IMF0 495 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 4930449I24RikQ9D5E3 319 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Cyp11b2P15539 500 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 TxlngQ8BHN1 524 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Spire2Q8K1S6 718 aa13.59□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Pcdha4O88689 947 aa13.58□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Sesn2P58043 480 aa13.58□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Fgd4Q91ZT5 766 aa13.58□□□□□ -0.23
Col6a3-208ENSMUST00000188587 Zfp174B9EJW5 407 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pde11aP0C1Q2 933 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nol6Q8R5K4 1152 aaKnown RBP13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Plcb4Q91UZ1 1175 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nckap5lQ6GQX2 1323 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 PpargP37238 505 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ighmbp2P40694 993 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Sem1P60897 70 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Slc25a24Q8BMD8 475 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nlgn1Q99K10 843 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Serpinb3bQ9D1Q5 387 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Chmp2aQ9DB34 222 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kif20bQ80WE4 1774 aaKnown RBP13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Supt3B0QZW4 406 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Fam207aP58468 219 aaKnown RBP13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 OtulinQ3UCV8 352 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Atg16l1Q8C0J2 607 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Tbc1d19Q8VDV7 526 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Cbwd1Q8VEH6 393 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pold4Q9CWP8 107 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kat6aQ8BZ21 2003 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Cpsf2O35218 782 aaKnown RBP13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Art2bO35975 289 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 GfapP03995 430 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Stx1bP61264 288 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pfkfb1P70266 471 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nom1Q3UFM5 854 aaKnown RBP13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 PapolaQ61183 739 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Bsdc1Q80Y55 427 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Trerf1Q8BXJ2 1205 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nod1Q8BHB0 953 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Zfp449Q8CB76 518 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ttc4Q8R3H9 386 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kbtbd12Q9D618 625 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Hdac6Q9Z2V5 1149 aa13.58□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Impdh2P24547 514 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Polr2fP61219 127 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pim2Q62070 370 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nkiras1Q8CEC5 192 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kctd10Q922M3 315 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms