RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Scn11aQ9R053 1765 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Col4a5Q63ZW6 1691 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sned1Q70E20 1403 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Klhl41A2AUC9 606 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tubb4bP68372 445 aaKnown RBP11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Zmym1Q3TJB1 983 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Rbm15bQ6PHZ5 887 aaKnown RBP11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Krit1Q6S5J6 736 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 QarsQ8BML9 775 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 LpxnQ99N69 386 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Mtfr1lQ9CWE0 289 aa11.96□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ulk4Q3V129 1303 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 CluhQ5SW19 1315 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ttc30a2A2AKQ8 664 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Stx8O88983 236 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Slc12a2P55012 1205 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Plekha7Q3UIL6 1118 aaKnown RBP11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Rc3h1Q4VGL6 1130 aaKnown RBP11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ccdc148Q6P5U8 527 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Q8C6G1 249 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ttc30a1Q99J38 664 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ttc30bQ9CY00 664 aa11.96□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Prss40A6H6T1 365 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm4307E9PZY4 289 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm4312K9J7E2 289 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tuft1O08970 390 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Api5O35841 504 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Fam83bQ0VBM2 1012 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Traf3ip1Q149C2 625 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 DSCC1Q14AI0 399 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ppp1r21Q3TDD9 780 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Znf697Q569E7 569 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Klra3Q64329 266 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Trim6Q8BGE7 488 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Dnajc17Q91WT4 303 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Prpf6Q91YR7 941 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 GzmnQ920S1 248 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 KynuQ9CXF0 464 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Calml3Q9D6P8 149 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Akr1c19G3X9Y6 323 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ube3aO08759 870 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Calm1P0DP26 149 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Calm2P0DP27 149 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Calm3P0DP28 149 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 D130040H23RikQ8BII3 405 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Sfr1Q8BP27 319 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Atp1a1Q8VDN2 1023 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 MlphQ91V27 590 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Unc45aQ99KD5 944 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 RarsQ9D0I9 660 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Get4Q9D1H7 327 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Nup98Q6PFD9 1816 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm5134E9QAB5 671 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mapkapk5O54992 473 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Dnm2P39054 870 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Il15P48346 162 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tubb5P99024 444 aaKnown RBP11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Madcam1Q61826 405 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Antxr2Q6DFX2 487 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 TraipQ8VIG6 470 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Apopt1Q9CQW7 192 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Dydc2Q9D3X8 139 aa11.95□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Psmd14O35593 310 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Wdhd1P59328 1117 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 SfswapQ3USH5 945 aaKnown RBP11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Asic3Q6X1Y6 530 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Cep95Q8BVV7 827 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tmem63cQ8CBX0 802 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Grin3bQ91ZU9 1003 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mis12Q9CY25 206 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 SyncQ9EPM5 470 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Hsd3b7Q9EQC1 369 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mkrn1Q9QXP6 481 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ankrd63A2ARS0 390 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm5934D3Z4U6 212 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Psd3Q2PFD7 1037 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Sco1Q5SUC9 284 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Usp50Q6P8X6 390 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Zfp446Q8C9M8 523 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Vmn1r218Q8R261 298 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Myo1hQ9D6A1 958 aa11.94□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Prdm11A2AGX3 565 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm10378F6XQQ1 160 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Sec24cG3X972 1096 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Atp6v0a2P15920 856 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ddx3yQ62095 658 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 PnocQ64387 187 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tldc1Q8K0P3 455 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Synpo2Q91YE8 1087 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ddx23D3Z0M9 819 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Folh1O35409 752 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 RaraP11416 462 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 OatP29758 439 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Q32P12 615 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Arhgef2Q60875 985 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 NntQ61941 1086 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Lrrn2Q6PHP6 730 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Nup133Q8R0G9 1155 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Exoc1Q8R3S6 894 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 EpgnQ924X1 152 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms