RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Eps8l1Q8R5F8 716 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Arhgef25Q9CWR0 618 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Cfap45Q9D9U9 551 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ift88Q61371 824 aa28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Lrrc8aQ80WG5 810 aa28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Zhx2Q8C0C0 836 aaKnown RBP28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Defb15Q8R2I5 79 aa28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Uchl5Q9WUP7 329 aa28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 GsdmeQ9Z2D3 512 aa28.95■■■□□ 2.22
Tpm1-216ENSMUST00000113707 4932429P05RikA2ADI4 785 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pagr1bF6V0H0 108 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pcdha4O88689 947 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Mpp3O88910 568 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Rnf216P58283 853 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Siah1bQ06985 282 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Igf2bp2Q5SF07 592 aaKnown RBP28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Cnot7Q60809 285 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Mapk4Q6P5G0 583 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Camsap3Q80VC9 1252 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Ushbp1Q8R370 680 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pagr1aQ99L02 253 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Vav3Q9R0C8 847 aa28.94■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Xxylt1Q3U4G3 392 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Sez6lQ6P1D5 963 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Txndc16Q7TN22 820 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Klhl30Q8C3F7 581 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Saal1Q9D2C2 474 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Scn3aA2ASI5 1947 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 C87977A2A958 498 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Gprasp2Q8BUY8 826 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Dcaf8Q8N7N5 591 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Slc18a1Q8R090 521 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Tnip1Q9WUU8 647 aa28.93■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pcif1P59114 706 aa28.92■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Lmbrd1Q8K0B2 537 aa28.92■■■□□ 2.22
Tpm1-216ENSMUST00000113707 F11Q91Y47 624 aa28.92■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Ccdc94Q9D6J3 314 aa28.92■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Mroh8E9PYI4 1049 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Brd2Q7JJ13 798 aaKnown RBP28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Morc2bQ8C5W4 1022 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Trim9Q8C7M3 817 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pcdha12Q91Y18 950 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Q9DAQ4 598 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 CsadQ9DBE0 493 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Tfr2Q9JKX3 798 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Plcb1Q9Z1B3 1216 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Bpifb4A2BGH0 617 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Pak1O88643 545 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 CfhP06909 1234 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Cdk4P30285 303 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Nlrp2Q4PLS0 1046 aaKnown RBP28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Hoxa13Q62424 386 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Fbxo28Q8BIG4 368 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Arid5bQ8BM75 1188 aaKnown RBP28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Nap1l5Q9JJF0 156 aa28.91■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Dnajc25A2ALW5 357 aa28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Gzf1Q4VBD9 706 aa28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Abcf1Q6P542 837 aaKnown RBP28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Tdrd3Q91W18 743 aaKnown RBP28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Mss51Q9D5Z5 446 aa28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Cmtm5Q9D6G9 156 aa28.9■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Esr2O08537 530 aa28.89■■■□□ 2.22
Tpm1-216ENSMUST00000113707 Mmp20P57748 482 aa28.89■■■□□ 2.22
Tpm1-216ENSMUST00000113707 NelfbQ8C4Y3 580 aa28.89■■■□□ 2.22
Tpm1-216ENSMUST00000113707 AoahO35298 574 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 RdxP26043 583 aaKnown RBP28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Gabpb2P81069 414 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 GabpaQ00422 454 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Sp4Q62445 782 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Slc4a8Q8JZR6 1089 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Atp5c1Q91VR2 298 aaKnown RBP28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Mfap3Q922T2 349 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Rnaseh2aQ9CWY8 301 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 NapaQ9DB05 295 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Mkrn1Q9QXP6 481 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Tjp3Q9QXY1 905 aa28.89■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Zc3h7bF8VPP8 982 aaKnown RBP28.88■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Hoxa11P31311 313 aa28.88■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Asic1Q6NXK8 526 aa28.88■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Ankrd35E9Q9D8 996 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Cyp2c68K7N6C2 491 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Setd4P58467 439 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Nol4P60954 483 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Stim1P70302 685 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Mcm6P97311 821 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Taok2Q6ZQ29 1240 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Taf6lQ8R2K4 616 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Nr3c2Q8VII8 978 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Krtap5-3Q9D226 196 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Thap2Q9D305 217 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Fam161bQ8CB59 589 aa28.87■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Dcdc2bF7BCK0 340 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Ugt1a6bK9J7B2 531 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 LeprP48356 1162 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Ugt1a6Q64435 531 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Ugt1a7cQ6ZQM8 531 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Olfr832Q7TRG9 312 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 BaatQ91X34 420 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 Efhd1Q9D4J1 240 aa28.86■■■□□ 2.21
Tpm1-216ENSMUST00000113707 EhhadhQ9DBM2 718 aa28.86■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms