RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Galnt17Q7TT15 598 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Lrrc15Q80X72 579 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Adnp2Q8CHC8 1165 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Baz2bA2AUY4 2123 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Trim12cD3Z3L3 497 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Nfil3O08750 462 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ppef2O35385 757 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Phka1P18826 1241 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Exosc10P56960 887 aaKnown RBP14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Brd9Q3UQU0 596 aaKnown RBP14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Fam189a2Q4FZH1 290 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Etaa1Q5SVT3 877 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 A1cfQ5YD48 595 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Kiaa1328Q6NZK5 612 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ccp110Q7TSH4 1004 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Phf24Q80TL4 400 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Epha10Q8BYG9 1007 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Atf7Q8R0S1 413 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Havcr2Q8VIM0 281 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Prb1Q91X93 504 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ppp2r2dQ925E7 453 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Chmp5Q9D7S9 219 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cnpy3Q9DAU1 276 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Plod3Q9R0E1 741 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ggps1Q9WTN0 300 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cdc42ep5Q9Z0X0 150 aa14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Obsl1D3YYU8 1804 aaKnown RBP14.17□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Wdr19Q3UGF1 1341 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ppp2r3aB2RXC8 1150 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Jakmip2D3YXK0 820 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Aldh1a1P24549 501 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Glud1P26443 558 aaKnown RBP14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Aco1P28271 889 aaKnown RBP14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Lrrc14bQ3UJB3 510 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Armc2Q3URY6 854 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Gm21985Q6P6P5 1106 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ints3Q7TPD0 1041 aaKnown RBP14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Gprc5cQ8K3J9 440 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Onecut3Q8K557 490 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Etv3Q8R4Z4 513 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Alas1Q8VC19 642 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 GldcQ91W43 1025 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Tle2Q9WVB2 767 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Arid3bQ9Z1N7 568 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ttc6G3UYY4 1857 aa14.16□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Parp1P11103 1013 aaKnown RBP14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Pik3r1P26450 724 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 CenpbP27790 599 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Oxr1Q4KMM3 866 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Rgl1Q60695 768 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Arhgef2Q60875 985 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Zfp943Q6NZP4 507 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ece2Q80Z60 881 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Aldh5a1Q8BWF0 523 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Agbl2Q8CDK2 862 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 SltmQ8CH25 1031 aaKnown RBP14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Iqsec1Q8R0S2 961 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Rbm19Q8R3C6 952 aaKnown RBP14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Fgd4Q91ZT5 766 aa14.15□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Supt3B0QZW4 406 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Klhl33G3UW92 533 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Stra6O70491 670 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Ms4a2P20490 235 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 NcanP55066 1268 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Kcna2P63141 499 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Gdf10P97737 476 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Cyp2e1Q05421 493 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Znf800Q0VEE6 662 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Rusc1Q8BG26 893 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Xpo5Q924C1 1204 aaKnown RBP14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Tmem39aQ9CYC3 486 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 PalmdQ9JHU2 551 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Rnf123Q5XPI3 1314 aa14.14□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Pgap3A2A559 320 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Dnai2A2AC93 623 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Ces1hD3Z298 562 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Capn2O08529 700 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 SfnO70456 248 aaKnown RBP14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 PuraP42669 321 aaKnown RBP14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Srebf2Q3U1N2 1130 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Elf1Q60775 612 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Eif3j2Q66JS6 263 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 1700001K19RikQ80ZT1 219 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Slc9a7Q8BLV3 726 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Ncaph2Q8BSP2 607 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Jakmip1Q8BVL9 626 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Atp2a1Q8R429 994 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Rassf3Q99P51 232 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Pkp2Q9CQ73 795 aaKnown RBP14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Tekt1Q9DAJ2 418 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Dusp6Q9DBB1 381 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Tmem191cQ9JJB1 302 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Homer1Q9Z2Y3 366 aa14.13□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Lamb2Q61292 1799 aa14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 AunipE9Q6Z5 340 aa14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Gp6P0C191 313 aa14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Art2aP17981 287 aa14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Ptpn11P35235 597 aa14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Mphosph8Q3TYA6 858 aaKnown RBP14.12□□□□□ -0.15
Ccdc28b-202ENSMUST00000106035 Rnpc3Q3UZ01 514 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms