RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 TbcbQ9D1E6 244 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Ifi202Q9R002 445 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Zscan25B2RX31 543 aa25.67■■□□□ 1.7
Scn1b-201ENSMUST00000098548 EporP14753 507 aa25.67■■□□□ 1.7
Scn1b-201ENSMUST00000098548 SsbP32067 415 aaKnown RBP25.67■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Gm973E9Q295 1059 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 MyocO70624 490 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Arhgef16Q3U5C8 713 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 VwdeQ6DFV8 926 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Znf653Q6YND2 615 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Dusp10Q9ESS0 483 aa25.66■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Tbc1d2B1AVH7 922 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 AU015836B2RUM3 263 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Kifap3P70188 793 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Map4k1P70218 827 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Stim2P83093 746 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Churc1Q6DG52 112 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Lrrd1Q8C0R9 853 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Myo1hQ9D6A1 958 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Hic2Q9JLZ6 619 aaKnown RBP25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Kansl3A2RSY1 903 aaKnown RBP25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Gjd2O54851 321 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Tpm3P21107 285 aaKnown RBP25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Stat3P42227 770 aaKnown RBP25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Lrrcc1Q69ZB0 1026 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Haus7Q8BKT8 364 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Pcdhb15Q91Y04 786 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Erich6bQ9D4S6 220 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Cmtm5Q9D6G9 156 aa25.65■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Hoxa11P31311 313 aa25.64■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Tmx2Q9D710 295 aaKnown RBP25.64■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Rasa2P58069 847 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Nbr1P97432 988 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Gtf2f1Q3THK3 508 aaKnown RBP25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Gas2l3Q3UWW6 683 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Btg1-ps1Q3V0S2 161 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Btg1-ps2Q3V0X0 161 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Cyp4f37Q3V1F1 546 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Olfr119Q7TRJ5 321 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Clec16aQ80U30 1036 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Ubap2lQ80X50 1107 aaKnown RBP25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Kiaa1024Q8K3V7 917 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Katnbl1Q9CWJ3 299 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Nlrp5Q9R1M5 1163 aa25.63■■□□□ 1.69
Scn1b-201ENSMUST00000098548 A0A0U1RNP2 1173 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 OgdhlE9Q7L0 1029 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Phldb3E9QAF4 648 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Acsl1P41216 699 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Adcy5P84309 1262 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 NfibP97863 570 aaKnown RBP25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 E4f1Q8CCE9 783 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Hip1rQ9JKY5 1068 aa25.62■■□□□ 1.69
Scn1b-201ENSMUST00000098548 C87977A2A958 498 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Arhgap4B1AUY3 965 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Celf5D3Z4T1 395 aaKnown RBP25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Jakmip3Q5DTN8 844 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Slc9a1Q61165 820 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Dlg1Q811D0 905 aaKnown RBP25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Zscan29E9Q5B4 869 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Rad51bO35719 350 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Gm10392Q3V3I3 114 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Entpd3Q8BFW6 529 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Brms1Q99N20 246 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 GdaQ9R111 454 aa25.61■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Sbf2E9PXF8 1872 aa25.6■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Tmem132bF7BAB2 1078 aa25.6■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Cep120Q7TSG1 988 aa25.6■■□□□ 1.69
Scn1b-201ENSMUST00000098548 H2-Q4Q8HWB2 354 aa25.6■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Acad12D3Z7X0 555 aa25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 AoahO35298 574 aa25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Cst8P32766 142 aa25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Hoxa13Q62424 386 aa25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Ift122Q6NWV3 1182 aa25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Nop14Q8R3N1 860 aaKnown RBP25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Luzp1Q8R4U7 1068 aaKnown RBP25.59■■□□□ 1.69
Scn1b-201ENSMUST00000098548 GclcP97494 637 aa25.58■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Rgl1Q60695 768 aa25.58■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Hdac4Q6NZM9 1076 aa25.58■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Csrnp2Q8BGQ2 534 aa25.58■■□□□ 1.69
Scn1b-201ENSMUST00000098548 Zfp853A0A1D5RM95 733 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Parp1P11103 1013 aaKnown RBP25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Igfbp4P47879 254 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Morf4l1P60762 362 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Gjb4Q02738 266 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ddrgk1Q80WW9 315 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Znf618Q80YY7 953 aaKnown RBP25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Q8BZJ8 459 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nod2Q8K3Z0 1020 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Dcaf8Q8N7N5 591 aa25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 NkapQ9D0F4 415 aaKnown RBP25.57■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nme9A0A1L1SUL6 329 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Hmx1O70218 332 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Aco1P28271 889 aaKnown RBP25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nedd1P33215 660 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Pla2g6P97819 807 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Mrgprb1Q3UG61 350 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Gprc5cQ8K3J9 440 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Tesk2Q8VCT9 570 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ctu1Q99J10 420 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Mmel1Q9JLI3 765 aa25.56■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms