RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Slc10a4Q3UEZ8 437 aa17.23■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Myo1fP70248 1099 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ccdc169Q8BXX9 214 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Carmil3Q3UFQ8 1375 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Lipo1J3QME6 396 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 CopeO89079 308 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 AdkP55264 361 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 D130040H23RikQ8BII3 405 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Antxr1Q9CZ52 562 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Taf4bG5E8Z2 855 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Birc2Q62210 612 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Krt40Q6IFX3 439 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Rbm15bQ6PHZ5 887 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ehd2Q8BH64 543 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Dph5Q9CWQ0 281 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 SmapQ9R0P4 181 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Fam207aP58468 219 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Pcif1P59114 706 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Wdr44Q6NVE8 915 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Kctd6Q8BNL5 237 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Psmd6Q99JI4 389 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ifi35Q9D8C4 286 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 MycbpQ9EQS3 103 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Strn3Q9ERG2 796 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 HnrnpcQ9Z204 313 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Akap12Q9WTQ5 1684 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Zbtb7aO88939 569 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Tph1P17532 447 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ubn1Q4G0F8 1135 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Hps6Q8BLY7 805 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Kbtbd13Q8C828 458 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Myef2Q8C854 591 aaKnown RBP17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 AacsQ9D2R0 672 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Drc3Q9D5E4 523 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Abcb6Q9DC29 842 aa17.22■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Enc1O35709 589 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Pik3caP42337 1068 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Sem1P60897 70 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Zbtb8osQ505B7 168 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Skiv2lQ6NZR5 1244 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Scyl2Q8CFE4 930 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Nrbp1Q99J45 535 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ccdc175E9PVB3 822 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Atp2a3Q64518 1038 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 IarsQ8BU30 1262 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Myoz2Q9JJW5 264 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ccdc87Q8CDL9 855 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Rnaseh2aQ9CWY8 301 aa17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 CltcQ68FD5 1675 aaKnown RBP17.21■□□□□ 0.35
Clcn3-203ENSMUST00000093490 Ppfia4B8QI36 1187 aa17.21■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Card6E9PWH2 1175 aa17.21■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Rsph3bQ9DA80 389 aa17.21■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm43638A0A0J9YU36 694 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Mroh7A2AVR2 1279 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ccdc78D3Z5T1 437 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dynll1P63168 89 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Glra4Q61603 456 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ovgp1Q62010 721 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Trim21Q62191 470 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Stx12Q9ER00 274 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Otud7bB2RUR8 840 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Actr5Q80US4 605 aaKnown RBP17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Bola2Q8BGS2 86 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Defb15Q8R2I5 79 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Prpf3Q922U1 683 aaKnown RBP17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 MesdQ9ERE7 224 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ankrd2Q9WV06 328 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Sept2P42208 361 aaKnown RBP17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cacna2d2Q6PHS9 1154 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dzip3Q7TPV2 1204 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cplx3Q8R1B5 158 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gpsm2Q8VDU0 679 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ddx39aQ8VDW0 427 aaKnown RBP17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Twf2Q9Z0P5 349 aaKnown RBP17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Vars2Q3U2A8 1060 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm10488Q4KL05 212 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Dnm3Q8BZ98 863 aa17.2■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gm11549A0A286YD83 63 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Syne3Q4FZC9 975 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ushbp1Q8R370 680 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Copb2O55029 905 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ric8aQ3TIR3 530 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Zbtb7bQ64321 544 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Stk38lQ7TSE6 464 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ppp2r3dQ9Z176 491 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Mtmr7Q9Z2C9 660 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Iqgap3F8VQ29 1632 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 DgkiD3YWQ0 1071 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Kcnk16G5E845 292 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Serpini1O35684 410 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Eef1bO70251 225 aaKnown RBP17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 CatspereP0DP43 985 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Gna15P30678 374 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Ppp1r7Q3UM45 361 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Tulp1Q9Z273 543 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Col15a1O35206 1367 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Panx2Q6IMP4 677 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Spata4Q8K3V1 295 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Apbb1ipQ8R5A3 670 aa17.19■□□□□ 0.34
Clcn3-203ENSMUST00000093490 Cbwd1Q8VEH6 393 aa17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 181.2 ms