RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Nek11Q8C0Q4 628 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccdc159Q8C963 411 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Fkbp6Q91XW8 327 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Spdl1Q923A2 608 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 MmadhcQ99LS1 296 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccdc91Q9D8L5 442 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Map3k5O35099 1380 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gbp6A0A0G2JDV3 611 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm21680A0A0G2JGR8 267 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Bpifb4A2BGH0 617 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm43302L7N1X8 611 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Casp14O89094 257 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 PdgfaP20033 211 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 SsbP32067 415 aaKnown RBP10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Sdc2P43407 202 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Hsd17b1P51656 344 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Calb2Q08331 271 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Lamc2Q61092 1191 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Krit1Q6S5J6 736 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Clec16aQ80U30 1036 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 WhrnQ80VW5 918 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Q8C5C9 218 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pms1Q8K119 917 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Abcf3Q8K268 709 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Taf6lQ8R2K4 616 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 DolkQ8R2Y3 534 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Grin3bQ91ZU9 1003 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Bbox1Q924Y0 387 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cttnbp2nlQ99LJ0 638 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ubxn6Q99PL6 442 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Il1rapl2Q9ERS6 686 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rad18Q9QXK2 509 aaKnown RBP10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pdcd7Q9WTY1 482 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Heatr4E9Q357 955 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ncf2O70145 525 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ephb2P54763 986 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cops2P61202 443 aaKnown RBP10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Usp46P62069 366 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ect2Q07139 913 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ell2Q3UKU1 639 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 KizQ3UXL4 695 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Clec4a4Q5YIR8 236 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Nlrp9bQ66X22 1003 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zpbp2Q6X786 326 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Clec4gQ8BNX1 294 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pold4Q9CWP8 107 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zcchc8Q9CYA6 709 aaKnown RBP10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 PplQ9R269 1755 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pnpla7A2AJ88 1352 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 4932429P05RikA2ADI4 785 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm28042B7ZCM9 1014 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Acad12D3Z7X0 555 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm6583E9Q8Z1 469 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Dnm2P39054 870 aaKnown RBP10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Hdhd2Q3UGR5 259 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccpg1Q640L3 753 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Hdac4Q6NZM9 1076 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tdpoz4Q6YCH2 370 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Apol10aQ8CCA5 318 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pde5aQ8CG03 865 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Trpm8Q8R4D5 1104 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Capn9Q9D805 690 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccdc89Q9DA73 370 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Scgb2b12S4R2L0 112 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Arhgap33Q80YF9 1305 aa10.68□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 C3P01027 1663 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Nup62clA2AG10 272 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Card9A2AIV8 536 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Nck2O55033 380 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rag1P15919 1040 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 DesP31001 469 aaKnown RBP10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gfpt1P47856 697 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tmtc1Q3UV71 942 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Antxr2Q6DFX2 487 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zranb1Q7M760 708 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zbed4Q80WQ9 1168 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Haus7Q8BKT8 364 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Psd4Q8BLR5 1005 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ncaph2Q8BSP2 607 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Sec62Q8BU14 398 aaKnown RBP10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Slc35b4Q8CIA5 331 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ubxn1Q922Y1 297 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Thap2Q9D305 217 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gpatch1Q9DBM1 930 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Abhd2Q9QXM0 425 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Atxn10P28658 475 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Msh2P43247 935 aaKnown RBP10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cdc25aP48964 514 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tlr7P58681 1050 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Meis3P97368 378 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tex35Q14BK3 207 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Trim43aQ3TL54 445 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rsrp1Q3UC65 298 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pdp2Q504M2 532 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm5169Q5M8P2 212 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Vps54Q5SPW0 977 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Prl2c1Q5SVL9 228 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 AgpsQ8C0I1 645 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ptcd1Q8C2E4 695 aaKnown RBP10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Abcf2Q99LE6 628 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms