RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Leng1Q9DB98 261 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Abcb10Q9JI39 715 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3739L7N296 216 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cbx3P23198 183 aaKnown RBP9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tbx3P70324 741 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mettl25Q6NXH8 597 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Polr2mQ6P6I6 366 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp2r5bQ6PD28 497 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cep128Q8BI22 1102 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Slc26a7Q8R2Z3 656 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Camkk1Q8VBY2 505 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rnf34Q99KR6 376 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cttnbp2nlQ99LJ0 638 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mpp5Q9JLB2 675 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Bub1O08901 1058 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ccdc116Q80X53 541 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pak2Q8CIN4 524 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 NclnQ8VCM8 563 aaKnown RBP9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Vps16Q920Q4 839 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Homer3Q99JP6 356 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Prl2a1Q9JHK0 228 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 C130060K24RikG3UWA8 416 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Chmp6P0C0A3 200 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Parp1P11103 1013 aaKnown RBP9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 AdkP55264 361 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cab39Q06138 341 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Best3Q6H1V1 669 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Jade3Q6IE82 823 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp6r2Q8R3Q2 923 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 AassQ99K67 926 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ino80bQ99PT3 375 aaKnown RBP9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rps6ka2Q9WUT3 733 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 D830030K20RikE9PYQ5 218 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm16440K7N6G6 218 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm8926L7MUE8 181 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm2244L7N2A3 218 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3278L7N2D2 218 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm8271L7N2E2 218 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm8050L7N2E3 205 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Smpd2O70572 419 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 RnaselQ05921 735 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Kcnk6Q3TBV4 313 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Spon2Q8BMS2 330 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rdh13Q8CEE7 334 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Azi2Q9QYP6 405 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Iqcj-Schip1A0A088MLT8 559 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Schip1P0DPB4 484 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Csnk2bP67871 215 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tmem67Q8BR76 992 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Txnl1Q8CDN6 289 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cabcoco1Q8CDT7 208 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Snw1Q9CSN1 536 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cby1Q9D1C2 127 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Slc29a1Q9JIM1 460 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp2r3dQ9Z176 491 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 4932429P05RikA2ADI4 785 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ccdc24E9PUW8 296 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Stag2O35638 1231 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp1r12cQ3UMT1 782 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttf1Q62187 859 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fam167aQ6P1G6 215 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dennd2cQ6P9P8 914 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nop53Q8BK35 484 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Stfa2l1Q8BWM3 103 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Agpat5Q9D1E8 365 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Wdr46Q9Z0H1 622 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Phactr2B1AVP0 632 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Akr1b10G5E895 316 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Olfml2bQ3V1G4 746 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Acap2Q6ZQK5 770 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ddx10Q80Y44 875 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Noc4lQ8BHY2 516 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Zbtb8bQ8CII0 484 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nde1Q9CZA6 344 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gsdmdc1Q9D8T2 487 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rsph3bQ9DA80 389 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 PpieQ9QZH3 301 aaKnown RBP9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Hsd3b6O35469 373 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Apoa4P06728 395 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Inpp1P49442 396 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cdkn1cP49919 348 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fermt1P59113 677 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Togaram2Q3TYG6 1002 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pcdhga7Q6DD96 935 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Trim35Q8C006 501 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pex12Q8VC48 359 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Farp2Q91VS8 1065 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Epn3Q91W69 636 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sike1Q9CPR7 207 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dennd6bQ9D9V7 585 aa9.78□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttc39aA2ACP1 578 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3252E9PUT9 216 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3002E9PW72 216 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3468E9QAJ8 216 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3164L7N2B9 238 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Impdh2P24547 514 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gch1Q05915 241 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sun3Q5SS91 320 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Alkbh2Q6P6J4 239 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Galnt17Q7TT15 598 aa9.77□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 73.7 ms