RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ccdc87Q8CDL9 855 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Mcf2A2AEU1 1111 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Stx1bP61264 288 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Uhmk1P97343 419 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm14685Q52KH6 695 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gas7Q60780 421 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Wdr91Q7TMQ7 748 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pank4Q80YV4 820 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Stx19Q8R1Q0 292 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Znf622Q91VY9 476 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 CgasQ8C6L5 507 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Creb3l3Q91XE9 479 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rgs3Q9DC04 966 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Traf5P70191 558 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Parp3Q3ULW8 533 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Map3k12Q60700 888 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Slx4Q6P1D7 1565 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dnaaf5B9EJR8 853 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Morc2aQ69ZX6 1030 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Zswim7Q9CWQ2 152 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Brpf3B2KF05 1204 aaKnown RBP16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pex3Q9QXY9 372 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pex11aQ9Z211 246 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Grin2bQ01097 1482 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Akr1b10G5E895 316 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Eya2O08575 532 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Casp14O89094 257 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 TxkP42682 527 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ahi1Q8K3E5 1047 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 NinQ61043 2035 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 A0A1W2P6Q8 802 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm9048A0A1W2P7H4 802 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 A0A1W2P7Z8 802 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm9046A0A1W2P855 802 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Krt4P07744 525 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Psmc1P62192 440 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm5414Q6IFZ8 552 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Epn1Q80VP1 575 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pard3Q99NH2 1333 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rab20P35295 233 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ankrd45Q810N6 248 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Magi1Q6RHR9 1471 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nuak1Q641K5 658 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 ErmapQ9JLN5 566 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Atg16l1Q8C0J2 607 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Tnip3A0A1D5RMN0 279 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Mmrn2A6H6E2 943 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Trappc10Q3TLI0 1259 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Cyp24a1Q64441 514 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ctdspl2Q8BG15 465 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Arhgap29Q8CGF1 1266 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Bag5Q8CI32 447 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rnf8Q8VC56 488 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Cdca7lQ922M5 438 aa16.98■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Prl3d2F6R3P9 224 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Map3k10Q66L42 940 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dnajc6Q80TZ3 938 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rmdn1Q9DCV4 305 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Maged2Q9ER67 616 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rfx7F8VPJ6 1459 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Akap5D3YVF0 745 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Hoxb7P09024 217 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 PapolaQ61183 739 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rbm41Q8JZV4 413 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 DexiQ9WUQ7 95 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Spata31d1bE9QA57 1361 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Caprin1Q60865 707 aaKnown RBP16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 E4f1Q8CCE9 783 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ap1g2O88512 791 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 YwhaeP62259 255 aaKnown RBP16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nek9Q8K1R7 984 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Krt24A1L317 512 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Anxa1P10107 346 aaKnown RBP16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nlrp9aQ66X03 949 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Sgsm2Q80U12 1005 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Tbc1d30Q69ZT9 766 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 4933409G03RikQ8C5U0 320 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Znf467Q8JZL0 594 aa16.97■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Mdh1P14152 334 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ap1m1P35585 423 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 VdrP48281 422 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Jdp2P97875 163 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Zbtb7bQ64321 544 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Cylc2B1AWN8 422 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 1700113H08RikE9Q9Q5 327 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Sash1P59808 1230 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 YwhahP68510 246 aaKnown RBP16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ankrd42Q3V096 527 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ccdc159Q8C963 411 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Lzts2Q91YU6 671 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Sdr42e1Q9D665 394 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ifi35Q9D8C4 286 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ap1s3Q7TN05 154 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ppil4Q9CXG3 492 aaKnown RBP16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Arhgap10Q6Y5D8 786 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Csgalnact2Q8C1F4 542 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pard3bQ9CSB4 1203 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Cgref1Q8R1U2 281 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dtnbp1Q91WZ8 352 aa16.96■□□□□ 0.31
Ubr3-201ENSMUST00000055758 ParvbQ9ES46 365 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms