RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Tas2r124Q7M718 309 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pgm5Q8BZF8 567 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Hexim1Q8R409 356 aaKnown RBP10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ppp2r5dQ91V89 594 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Rhobtb2Q91V93 728 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Lamb2Q61292 1799 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 OgdhlE9Q7L0 1029 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 PparaP23204 468 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Adamts19P59509 1210 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Evi5P97366 809 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ecm1Q61508 559 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Krt87Q6IMF0 495 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Zdhhc15Q8BGJ0 337 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ctu1Q99J10 420 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 MsraQ9D6Y7 233 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Hic2Q9JLZ6 619 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Znhit2Q9QY66 399 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 AdnpQ9Z103 1108 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gadd45bP22339 160 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Kif3aP28741 701 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Eepd1Q3TGW2 569 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ccdc189Q6NZQ0 333 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Nap1l4Q78ZA7 375 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ubap2lQ80X50 1107 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Micall1Q8BGT6 870 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Hsdl1Q8BTX9 330 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 RnpepQ8VCT3 650 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Wdr64Q9D565 1086 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Calml3Q9D6P8 149 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Sh2b2Q9JID9 621 aa10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ccnt1Q9QWV9 724 aaKnown RBP10.07□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pramel3A2AHA7 463 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Map7d1A2AJI0 846 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gm7903A2AWL1 463 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 AV320801A2AWL3 467 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gm15023L7MUB4 467 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cdc25aP48964 514 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Hmgcs2P54869 508 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Adamts10P58459 1104 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gtf2f1Q3THK3 508 aaKnown RBP10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 IqcgQ80W32 419 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Krt23Q99PS0 422 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Krt34Q9D646 392 aa10.06□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Oip5A2AQ14 241 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Lrrc32G3XA59 663 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Hoxd11P23813 323 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cdh15P33146 784 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Igfbp4P47879 254 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Psg29Q3URN6 468 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cnnm4Q69ZF7 771 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ssh1Q76I79 1042 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 GlyctkQ8QZY2 523 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Lypla2Q9WTL7 231 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Dennd4aE9Q8V6 1869 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cntnap5cQ0V8T7 1305 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Rsbn1lD3Z0K6 821 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Trim5E9PV98 497 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gcnt4E9Q649 455 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gm21969J3QJZ1 289 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 SpibO35906 267 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pik3r1P26450 724 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Acsl1P41216 699 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ube2hP62257 183 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pou2f2Q00196 463 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Rnf157Q3TEL6 685 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gtf3c3Q3TMP1 882 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 C87499Q3UX49 493 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ivns1abpQ920Q8 642 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Rassf3Q99P51 232 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Npm3Q9CPP0 175 aaKnown RBP10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Alpk1Q9CXB8 1231 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cd274Q9EP73 290 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Tfr2Q9JKX3 798 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Syt5Q9R0N5 386 aa10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Acot9Q9R0X4 439 aaKnown RBP10.05□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Slc39a2G3X943 309 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Itgb5O70309 798 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 SfnO70456 248 aaKnown RBP10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Mpp3O88910 568 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Nup88Q8CEC0 753 aaKnown RBP10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Kcnv2Q8CFS6 562 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ago4Q8CJF8 861 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Dnajc19Q9CQV7 116 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Iqca1Q9CUL5 857 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ndufa8Q9DCJ5 172 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pgap3A2A559 320 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Tmigd3G3X8R9 209 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Gm4758L7N258 96 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Tpd52l1O54818 204 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Nr5a1P33242 462 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Kcnj11Q61743 390 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Atp1a3Q6PIC6 1013 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Atg4cQ811C2 458 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Lrrd1Q8C0R9 853 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Iws1Q8C1D8 766 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Appl2Q8K3G9 662 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Mrps25Q9D125 171 aaKnown RBP10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Saal1Q9D2C2 474 aa10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Pabpc6Q9D4E6 643 aaKnown RBP10.04□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Sertad1Q9JL10 236 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms