RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cdk4P30285 303 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Cbx2P30658 519 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 GlyctkQ8QZY2 523 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Havcr2Q8VIM0 281 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Scrn1Q9CZC8 414 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 PdhbQ9D051 359 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Polr2dQ9D7M8 142 aaKnown RBP25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Lmbr1Q9JIT0 490 aa25.83■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Atp8b5A3FIN4 1183 aa25.83■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Lrrc32G3XA59 663 aa25.83■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Cdkn1cP49919 348 aa25.83■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Zcwpw1Q6IR42 630 aa25.83■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Dcaf15Q6PFH3 600 aa25.83■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Trpm7Q923J1 1863 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Parp1P11103 1013 aaKnown RBP25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Rnf216P58283 853 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Kcnj11Q61743 390 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Krt87Q6IMF0 495 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Zfp251Q6PCX8 632 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 LpxnQ99N69 386 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Sertad1Q9JL10 236 aa25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Ccnt1Q9QWV9 724 aaKnown RBP25.82■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Ripor3A1L3T7 938 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Igf2bp2Q5SF07 592 aaKnown RBP25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Ehd2Q8BH64 543 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 F11Q91Y47 624 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 AdnpQ9Z103 1108 aaKnown RBP25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 NfibP97863 570 aaKnown RBP25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Psg29Q3URN6 468 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Gys2Q8VCB3 704 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Dnajc19Q9CQV7 116 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Krt34Q9D646 392 aa25.81■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Zc3h7bF8VPP8 982 aaKnown RBP25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Hdac4Q6NZM9 1076 aa25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Washc1Q8VDD8 475 aa25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Anapc4Q91W96 807 aa25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Saal1Q9D2C2 474 aa25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Large1Q9Z1M7 756 aa25.8■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Bach1P97302 739 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Cep120Q7TSG1 988 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Clic6Q8BHB9 596 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Vps53Q8CCB4 832 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Gprc5cQ8K3J9 440 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Acat1Q8QZT1 424 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Rfc4Q99J62 364 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Vta1Q9CR26 309 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 SerhlQ9EPB5 311 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Rsbn1lD3Z0K6 821 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Parp2O88554 559 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 CebpzP53569 1052 aaKnown RBP25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Xxylt1Q3U4G3 392 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Clec16aQ80U30 1036 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Mettl5Q8K1A0 209 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Usp33Q8R5K2 909 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Bco2Q99NF1 532 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Bcs1lQ9CZP5 418 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Krtap5-3Q9D226 196 aa25.79■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Pus7B7ZNL8 666 aaKnown RBP25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Trim30aP15533 496 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Fam83hQ148V8 1209 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Eif3j2Q66JS6 263 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 BcrQ6PAJ1 1270 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 CtifQ6PEE2 600 aaKnown RBP25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Bbs9Q811G0 885 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Rbm46P86049 533 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Ero1bQ8R2E9 467 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Usp34Q6ZQ93 3582 aa25.78■■□□□ 1.72
Upf3a-201ENSMUST00000043767 PatjQ63ZW7 1834 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Ankrd13cQ3UX43 541 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Arhgef19Q8BWA8 802 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Sgpp1Q9JI99 430 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Dicer1Q8R418 1916 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Brca1P48754 1812 aa25.77■■□□□ 1.72
Upf3a-201ENSMUST00000043767 Rexo5D3YW29 759 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Usp17leQ7M764 540 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Vnn1Q9Z0K8 512 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Clec11aO88200 328 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Brd9Q3UQU0 596 aaKnown RBP25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 DaglbQ91WC9 669 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 NkapQ9D0F4 415 aaKnown RBP25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Snrnp35Q9D384 244 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ifi35Q9D8C4 286 aa25.76■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Map7d1A2AJI0 846 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Armc3A2AU72 881 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ms4a1P19437 291 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Map4k1P70218 827 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Trub2Q91WG3 331 aaKnown RBP25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Fsip1Q9D3V5 435 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 FosP01101 380 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Cxcl9P18340 126 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Mex3cQ05A36 652 aaKnown RBP25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 KhsrpQ3U0V1 748 aaKnown RBP25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 RubcnQ80U62 956 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Sass6Q80UK7 654 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Lrrc24Q8BHA1 521 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Q9DAQ4 598 aa25.75■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Pcif1P59114 706 aa25.74■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Serpina10Q8R121 448 aa25.74■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Kbtbd4Q8R179 534 aa25.74■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ubxn4Q8VCH8 506 aa25.74■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms