RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Trap1Q9CQN1 706 aaKnown RBP21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Knop1Q9Z2Q2 478 aaKnown RBP21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Adgra3Q7TT36 1310 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Odf2A3KGV1 830 aaKnown RBP21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Snai1Q02085 264 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Clul1Q3ZRW6 464 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ccdc148Q6P5U8 527 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Srrm3Q80WV7 648 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 HyiQ8R1F5 277 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Washc1Q8VDD8 475 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 UvssaQ9D479 717 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Serpinb12Q9D7P9 423 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Nck2O55033 380 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 NppbP40753 121 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Nol4P60954 483 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Klra4Q60651 263 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Usp50Q6P8X6 390 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Traf3ip3Q8C0G2 513 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Tor1aip1Q921T2 595 aaKnown RBP21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 CpvlQ9D3S9 478 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Smco2Q9DA21 347 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Psmd10Q9Z2X2 231 aa21.15■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Armc3A2AU72 881 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Slc39a2G3X943 309 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ppef2O35385 757 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Stag2O35638 1231 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Wee1P47810 646 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Acbd5Q5XG73 508 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ppp1r1bQ60829 194 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sh3gl2Q62420 352 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ccdc172Q810N9 267 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 P3h4Q8K2B0 443 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 HmcesQ8R1M0 353 aaKnown RBP21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Atp1a1Q8VDN2 1023 aaKnown RBP21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Trub2Q91WG3 331 aaKnown RBP21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Mad2l2Q9D752 211 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Popdc2Q9ES82 367 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ercc4Q9QZD4 917 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ubr3Q5U430 1889 aa21.14■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ano3A2AHL1 981 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Magea10A2AMW4 325 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Capza3P70190 299 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Psg29Q3URN6 468 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Armc2Q3URY6 854 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 PRAG1Q571I4 1179 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Cep70Q6IQY5 616 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Jade2Q6ZQF7 829 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 McamQ8R2Y2 648 aaKnown RBP21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Nol7Q9D7Z3 254 aaKnown RBP21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Lztfl1Q9JHQ5 299 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Stat2Q9WVL2 923 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Mtmr9Q9Z2D0 545 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 JcadQ5DTX6 1320 aa21.14■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Phrf1A6H619 1682 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Rufy1Q8BIJ7 712 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 1700018B08RikQ9DA83 213 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Prl2c5Q9JLV9 222 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Trim55G3X8Y1 545 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Trim43aQ3TL54 445 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gm5592Q3V0A6 857 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gngt1Q61012 74 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Pip5kl1Q6U7H8 395 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Rcor2Q8C796 523 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ubxn1Q922Y1 297 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Xrcc4Q924T3 326 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Glrx3Q9CQM9 337 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 RpainQ9CWY9 219 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Akt1s1Q9D1F4 257 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ndst4Q9EQW8 872 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Git2Q9JLQ2 708 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Trip6Q9Z1Y4 480 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Letm1Q9Z2I0 738 aa21.13■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Dnai2A2AC93 623 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 MybP06876 636 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gna11P21278 359 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Nap1l1P28656 391 aaKnown RBP21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Il15P48346 162 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Zmym1Q3TJB1 983 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ddx3xQ62167 662 aaKnown RBP21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Antxr2Q6DFX2 487 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Micall1Q8BGT6 870 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 GlyctkQ8QZY2 523 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Atp1b3P97370 278 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Cdcp1Q5U462 833 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Mcm7Q61881 719 aaKnown RBP21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Msantd4Q91YU3 345 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ubxn6Q99PL6 442 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Sh2b2Q9JID9 621 aa21.12■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Stox1B2RQL2 990 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ankrd35E9Q9D8 996 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Il27raO70394 623 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Mum1l1Q4VA55 681 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ezh2Q61188 746 aaKnown RBP21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Fxr1Q61584 677 aaKnown RBP21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Krt79Q8VED5 531 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Eif4a3Q91VC3 411 aaKnown RBP21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Grin3bQ91ZU9 1003 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 NsmfQ99NF2 532 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 EhhadhQ9DBM2 718 aa21.11■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Arid4aF8VPQ2 1261 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms