RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Becn2P0DM65 447 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pde1bQ01065 535 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 RubcnlQ3TD16 648 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Eif3j1Q3UGC7 261 aaKnown RBP11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Prm3Q62100 101 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Eif3j2Q66JS6 263 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Dhx40Q6PE54 779 aaKnown RBP11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 6820408C15RikQ8BJX2 354 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pagr1aQ99L02 253 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Dynll2Q9D0M5 89 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ifi207E9Q3L4 978 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Eddm13E9Q7F5 164 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ctnna1P26231 906 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nek1P51954 1203 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Agbl1Q09M05 972 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ctdnep1Q3TP92 244 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 XlrP05531 208 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tshz1Q5DTH5 1084 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 AlcamQ61490 583 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Churc1Q6DG52 112 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Zcchc8Q9CYA6 709 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 IqcdQ9D3V1 458 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Calr3Q9D9Q6 380 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Dpp7Q9ET22 506 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tmod4Q9JLH8 345 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 MetP16056 1379 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Fbxl16A2RT62 479 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cpb1B2RS76 415 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tnni3P48787 211 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ckap2Q3V1H1 664 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Map10Q8BJS7 891 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Fam102bQ8BQS4 339 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ccdc169Q8BXX9 214 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Dph5Q9CWQ0 281 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Grtp1Q9D3N8 359 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 SyncQ9EPM5 470 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gucy1a3Q9ERL9 691 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rsph10bE9PYQ0 876 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 P4hbP09103 509 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Eps15P42567 897 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Trim21Q62191 470 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pabpc4Q6PHQ9 660 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Acad11Q80XL6 779 aa11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Atp1a1Q8VDN2 1023 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Xrcc5P27641 732 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sh3bp1P55194 680 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cct6bQ61390 531 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Madcam1Q61826 405 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ces1dQ8VCT4 565 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Krt20Q9D312 431 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ndst4Q9EQW8 872 aa11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 SmapQ9R0P4 181 aaKnown RBP11.27□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Copb2O55029 905 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Slc4a1P04919 929 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Aimp1P31230 310 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Slc9a2Q3ZAS0 814 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Znf365Q8BG89 408 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ybx3Q9JKB3 361 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Dhx37Q6NZL1 1150 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc38Q8CDN8 563 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ints5Q8CHT3 1018 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Prss51A0A286YDY8 319 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Usp53P15975 1069 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gsta4P24472 222 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 SkiQ60698 725 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cep70Q6IQY5 616 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cnot10Q8BH15 744 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ddx19bQ8BZY3 494 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Slc26a7Q8R2Z3 656 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 FibpQ9JI19 357 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gbp2Q9Z0E6 589 aa11.27□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc6D3YZP9 469 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Phldb3E9QAF4 648 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rnaseh1O70338 285 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 LtkP08923 888 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cyp11b2P15539 500 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc84Q4VA36 332 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kctd1Q5M956 257 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Pabpn1lQ5XFR0 273 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc15Q8C9M2 810 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tmem47Q9JJG6 181 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tex21Q9R0U9 575 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 A0A286YCQ6 122 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Arhgef10lA2AWP8 1280 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Mdh1P14152 334 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Q3TTJ4 293 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Snip1Q8BIZ6 383 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Srp68Q8BMA6 625 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kiaa0319lQ8K135 1048 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Med10Q9CXU0 135 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Usp14Q9JMA1 493 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tmem131lQ3U3D7 1597 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Setd1bQ8CFT2 1985 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Vmn2r71L7N2D8 855 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Capn2O08529 700 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gm10488Q4KL05 212 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 GartQ64737 1010 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tmem87aQ8BXN9 555 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccz1Q8C1Y8 480 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kif1aP33173 1695 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 59.4 ms