RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Terb1Q8C0V1 768 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cst12Q9DAN8 128 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Trpc3Q9QZC1 836 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Nos1Q9Z0J4 1429 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Pcif1P59114 706 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Nsun2Q1HFZ0 757 aaKnown RBP20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Atp2a1Q8R429 994 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lrrc32G3XA59 663 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Surf1P09925 306 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ric8aQ3TIR3 530 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ddx3yQ62095 658 aaKnown RBP20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 IarsQ8BU30 1262 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cfap36Q8C6E0 343 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lsm14bQ8CGC4 385 aaKnown RBP20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Snrnp35Q9D384 244 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Fam84aQ9D650 292 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Rsph3bQ9DA80 389 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lonrf2B2RT44 518 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Klhl29Q80T74 875 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cbwd1Q8VEH6 393 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Pstpip2Q99M15 334 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Usp53P15975 1069 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ces3aQ63880 571 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 GartQ64737 1010 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ttll4Q80UG8 1193 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Gbp9Q8BTS3 619 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Znf428Q8C1M2 176 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Phf20l1Q8CCJ9 1013 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ces3bQ8VCU1 571 aa20.19■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Taf4E9QAP7 1042 aaKnown RBP20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 SpertQ32MG2 446 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 CnstQ8CBC4 711 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Kctd10Q922M3 315 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 4931423N10RikQ9D4J9 382 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 1700109H08RikQ9D9C0 210 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cyth1Q9QX11 398 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Zfp408H7BX78 710 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ap1m1P35585 423 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ccdc110Q3V125 848 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Calr3Q9D9Q6 380 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 FerP70451 823 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Syap1Q9D5V6 365 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Znf608Q56A10 1511 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Jdp2P97875 163 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Dpp8Q80YA7 892 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Tmem191cQ9JJB1 302 aa20.18■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cep152A2AUM9 1736 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Art2bO35975 289 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 P4hbP09103 509 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 HdlbpQ8VDJ3 1268 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ror2Q9Z138 944 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Svs3aF2Z472 265 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cog5Q8C0L8 829 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 CactinQ9CS00 772 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Med10Q9CXU0 135 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 H2-OaQ9QWV1 250 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Idh1O88844 414 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 CopeO89079 308 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Atf2P16951 487 aaKnown RBP20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Il15P48346 162 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Sik1Q60670 779 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Psma8Q9CWH6 250 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Trmt112Q9DCG9 125 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Slc12a7Q9WVL3 1083 aa20.17■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Krt90E9Q1Z0 538 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Gja8P28236 440 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Vsnl1P62761 191 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 AsphQ8BSY0 741 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Tgs1Q923W1 853 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Nlrp4cQ3TKR3 982 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 LrmpQ60664 539 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Apbb1ipQ8R5A3 670 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ppil4Q9CXG3 492 aaKnown RBP20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Casp14O89094 257 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 GssP51855 474 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Bank1Q80VH0 783 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Trim59Q922Y2 403 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 CaluO35887 315 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Snx12O70493 165 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Slc38a10Q5I012 1090 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lmbrd1Q8K0B2 537 aa20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Gtf2iQ9ESZ8 998 aaKnown RBP20.16■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cyp3a59D3Z2W7 503 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Yipf3Q3UDR8 347 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Irak1Q62406 710 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Zbtb1Q91VL9 713 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Tex13cD3YU32 604 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Fam178bQ24JP3 464 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Mapk6Q61532 720 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 GypcQ78HU7 95 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 EpgnQ924X1 152 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Dhx58Q99J87 678 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Arl2bpQ9D385 163 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Sept1P42209 366 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Slc7a1Q09143 622 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 RgmbQ7TQ33 436 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Clca2Q8BG22 942 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lrrc8cQ8R502 803 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Spata18Q0P557 537 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Snx14Q8BHY8 964 aa20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms