RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Arl8aQ8VEH3 186 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Adgra3Q7TT36 1310 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Aknad1E9Q8N6 675 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cct6bQ61390 531 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Churc1Q6DG52 112 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pabpc4Q6PHQ9 660 aaKnown RBP9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Drd5Q8BLD9 478 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Kcnv2Q8CFS6 562 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pspc1Q8R326 523 aaKnown RBP9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Sorbs3Q9R1Z8 733 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Usp17lbE9Q9U0 468 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm5134E9QAB5 671 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tnnc1P19123 161 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Sap130Q8BIH0 1057 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pdcd6ipQ9WU78 869 aaKnown RBP9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 DexiQ9WUQ7 95 aa9.38□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Zfp142G5E869 1843 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm7356A0A087WSA6 508 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cul4bA2A432 970 aaKnown RBP9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Eddm13E9Q7F5 164 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pcif1P59114 706 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Fhdc1Q3ULZ2 1149 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tspyl3Q3UYP3 334 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Inpp5bQ8K337 993 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ccdc83Q9D4V3 305 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 RabggtaQ9JHK4 567 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Fxr2Q9WVR4 673 aaKnown RBP9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Rc3h1Q4VGL6 1130 aaKnown RBP9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Zmym2Q9CU65 1376 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ndst4Q9EQW8 872 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nwd2Q6P5U7 1742 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm3409A0A0G2JE67 319 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Bnip3O55003 187 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ess2O70279 479 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Znf652Q5DU09 608 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Adck2Q6NSR3 617 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cog5Q8C0L8 829 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tcp11l2Q8K1H7 517 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Mtmr6Q8VE11 617 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Fbf1A2A870 1173 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Exoc3Q6KAR6 755 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 SfpqQ8VIJ6 699 aaKnown RBP9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Rhobtb3Q9CTN4 611 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 SynrgQ5SV85 1306 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ugt1a6bK9J7B2 531 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Copb2O55029 905 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Xxylt1Q3U4G3 392 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ugt1a6Q64435 531 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ugt1a7cQ6ZQM8 531 aa9.37□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm43738A0A0G2JEA5 862 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Prss51A0A286YDY8 319 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gas7Q60780 421 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Haus4Q8BFT2 363 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Bzw2Q91VK1 419 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cd2bp2Q9CWK3 342 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 2310002L09RikQ9D7L5 217 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 A430078G23RikE9Q7Y4 484 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm10134F6ZQC6 126 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nr1i3O35627 358 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tpp1O89023 562 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tcp1P11983 556 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 LtbrP50284 415 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gdf10P97737 476 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dcaf17Q3TUL7 519 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Qrich1Q3UA37 777 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Krit1Q6S5J6 736 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ccdc181Q80ZU5 509 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nop53Q8BK35 484 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Zswim4Q8C7B8 1101 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Lmbrd1Q8K0B2 537 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Spats2Q8K1N4 545 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tex21Q9R0U9 575 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Myh1Q5SX40 1942 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ap1b1O35643 943 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tlr8P58682 1032 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pls1Q3V0K9 630 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Krt9Q6RHW0 743 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tmc4Q7TQ65 694 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Sdad1Q80UZ2 687 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 IarsQ8BU30 1262 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Morc2bQ8C5W4 1022 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Lrp2bpQ9D4C6 346 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Rwdd2aQ9D9S3 292 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dydc1Q9D9T0 175 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 AgtP11859 477 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 SlmapQ3URD3 845 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ccdc114Q3UX62 658 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm5935Q497S0 212 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ddx19bQ8BZY3 494 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nup58Q8R332 587 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Slc44a4Q91VA1 707 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm4758L7N258 96 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 PtgdrP70263 357 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 NeblQ0II04 452 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tbx2Q60707 711 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Smarca1Q6PGB8 1046 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Krt222Q8CCX5 294 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 NkapQ9D0F4 415 aaKnown RBP9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Duox1A2AQ92 1551 aa9.36□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cdc27A2A6Q5 825 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms