RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Fhdc1Q3ULZ2 1149 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Pim2Q62070 370 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Snd1Q78PY7 910 aaKnown RBP27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Maip1Q8BHE8 291 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Drd5Q8BLD9 478 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Spice1Q8C804 860 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Styxl1Q9DAR2 321 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Cmtr1Q9DBC3 837 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Ifih1Q8R5F7 1025 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Cul5Q9D5V5 780 aa27.65■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Map9Q3TRR0 646 aa27.64■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Tsr1Q5SWD9 803 aa27.64■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Ift74Q8BKE9 600 aa27.64■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Onecut3Q8K557 490 aa27.64■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Fsip1Q9D3V5 435 aa27.64■■■□□ 2.02
Cldnd1-201ENSMUST00000023426 Fdx1P46656 188 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Vars2Q3U2A8 1060 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Jade2Q6ZQF7 829 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Nap1l4Q78ZA7 375 aaKnown RBP27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Arhgef19Q8BWA8 802 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 MtrrQ8C1A3 696 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Psmd2Q8VDM4 908 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Glrx3Q9CQM9 337 aa27.64■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Mx1P09922 631 aa27.63■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Cdk17Q8K0D0 523 aa27.63■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Gm1993A6X8I0 212 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 SlxD3Z347 212 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Zfp597E9Q6S0 419 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ubap1lG3UW59 384 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Mxd3Q80US8 206 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Eef1gQ9D8N0 437 aaKnown RBP27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Pdcd6ipQ9WU78 869 aaKnown RBP27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 PodnQ7TQ62 611 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 FignQ9ERZ6 759 aa27.62■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Chrna9G3X8Z7 479 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ube3aO08759 870 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Sept2P42208 361 aaKnown RBP27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Nkx2-5P42582 318 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Cdc25aP48964 514 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Atp6v1aP50516 617 aaKnown RBP27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Pstpip1P97814 415 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Sept14Q9DA97 430 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Sertad1Q9JL10 236 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Psmd14O35593 310 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 IkbkbO88351 757 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 PtgdrP70263 357 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ttbk2Q3UVR3 1243 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Lamc2Q61092 1191 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Trpc6Q61143 930 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Sema4bQ62179 823 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Hirip3Q8BLH7 601 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Bicdl2Q8CHW5 507 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Smc1bQ920F6 1248 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Card14Q99KF0 999 aa27.61■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Mcm7Q61881 719 aaKnown RBP27.6■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Smtnl1Q99LM3 459 aa27.6■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Tmem39aQ9CYC3 486 aa27.6■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 PdclQ9DBX2 301 aa27.6■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ccnt1Q9QWV9 724 aaKnown RBP27.6■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 AW822073A0A0N4SUK1 652 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Gm28042B7ZCM9 1014 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ccdc42Q5SV66 316 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Fez2Q6TYB5 348 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ctdp1Q7TSG2 960 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Bbs9Q811G0 885 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Wdr3Q8BHB4 942 aaKnown RBP27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Igdcc3Q8BQC3 813 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Eif3cQ8R1B4 911 aaKnown RBP27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 AdnpQ9Z103 1108 aaKnown RBP27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ly75Q60767 1723 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Mtmr2Q9Z2D1 643 aa27.59■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ifi207E9Q3L4 978 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 RaraP11416 462 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Anp32eP97822 260 aaKnown RBP27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Tubb5P99024 444 aaKnown RBP27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Sap30bpQ02614 308 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 SmapQ9R0P4 181 aaKnown RBP27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 1700003F12RikA2AKE5 210 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Nedd1P33215 660 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Man1a2P39098 641 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Setd4P58467 439 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Tmtc1Q3UV71 942 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Oxr1Q4KMM3 866 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Map3k12Q60700 888 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Ppp1r11Q8K1L5 131 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Yipf1Q91VU1 306 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Krtap5-3Q9D226 196 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Lonp2Q9DBN5 852 aa27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Knop1Q9Z2Q2 478 aaKnown RBP27.58■■■□□ 2.01
Cldnd1-201ENSMUST00000023426 Gm5737A0A140LI11 423 aa27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 Hnrnph3D3Z3N4 346 aaKnown RBP27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 Prl2c3P04768 224 aa27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 Abcb4P21440 1276 aa27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 PigsQ6PD26 555 aaKnown RBP27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 Tmc4Q7TQ65 694 aa27.57■■■□□ 2
Cldnd1-201ENSMUST00000023426 PurbO35295 324 aaKnown RBP27.56■■■□□ 2
Cldnd1-201ENSMUST00000023426 Mybl2P48972 704 aa27.56■■■□□ 2
Cldnd1-201ENSMUST00000023426 ItpripQ3TNL8 555 aa27.56■■■□□ 2
Cldnd1-201ENSMUST00000023426 Kctd1Q5M956 257 aa27.56■■■□□ 2
Cldnd1-201ENSMUST00000023426 Ddx3yQ62095 658 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms