RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Nhsl1Q8CAF4 1587 aa13.12□□□□□ -0.31
Trim35-201ENSMUST00000022623 CalrP14211 416 aaKnown RBP13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Plekha7Q3UIL6 1118 aaKnown RBP13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Zfp397Q7TNK4 527 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Tmem39bQ810L4 492 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Onecut3Q8K557 490 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Galnt15Q9D2N8 638 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Myh3P13541 1940 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Shank3Q4ACU6 1730 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Psmd14O35593 310 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Foxn3Q499D0 457 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Nab2Q61127 525 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Csgalnact2Q8C1F4 542 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Defb15Q8R2I5 79 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Apbb1ipQ8R5A3 670 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Vstm4T1NXB5 319 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Duox1A2AQ92 1551 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Gm1993A6X8I0 212 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 SlxD3Z347 212 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 AaasP58742 546 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Zfp781Q0P5U5 243 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Tom1l2Q5SRX1 507 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Olfr832Q7TRG9 312 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Lca5Q80ST9 704 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Fam161bQ8CB59 589 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Ifih1Q8R5F7 1025 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 AatfQ9JKX4 526 aaKnown RBP13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cabp5Q9JLK3 173 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Git2Q9JLQ2 708 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Uso1Q9Z1Z0 959 aaKnown RBP13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Myh15E9Q264 1925 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 PappaQ8R4K8 1624 aa13.11□□□□□ -0.31
Trim35-201ENSMUST00000022623 Ccdc78D3Z5T1 437 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cdk4P30285 303 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Pdrg1P59048 133 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Tshz1Q5DTH5 1084 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Panx2Q6IMP4 677 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Fbxo18Q8K2I9 1042 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cep83Q9D5R3 692 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 DohhA0A1Y7VJ29 135 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Gm7168A0AUV4 508 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 1700018F24RikB2RW27 314 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Adam7O35227 789 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Gucy1b3O54865 620 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Etf1Q8BWY3 437 aaKnown RBP13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 PdiltQ9DAN1 588 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Lmnb1P14733 588 aaKnown RBP13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Sfi1Q3UZY0 1216 aaKnown RBP13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Rbm12b2Q66JV4 834 aaKnown RBP13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Exoc8Q6PGF7 716 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Scfd1Q8BRF7 639 aaKnown RBP13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Rassf4Q8CB96 322 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Ushbp1Q8R370 680 aa13.1□□□□□ -0.31
Trim35-201ENSMUST00000022623 Calcoco2A2A6M5 331 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Pde4aO89084 844 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Ca8P28651 291 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Ccdc34Q3UI66 367 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Psen2Q61144 448 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Tm4sf1Q64302 202 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Camsap3Q80VC9 1252 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Prpf40bQ80W14 870 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Fam43bA2AM80 330 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Hps5P59438 1126 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cct6aP80317 531 aaKnown RBP13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cyp2e1Q05421 493 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Acot10Q32MW3 439 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Arglu1Q3UL36 271 aaKnown RBP13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 OplahQ8K010 1288 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Txndc5Q91W90 417 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Fam76aQ922G2 307 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Efhd1Q9D4J1 240 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Klrc1Q9Z202 244 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Serpina16D3Z660 418 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Man1a2P39098 641 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Pafah1b1P63005 410 aaKnown RBP13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Cep112Q5PR68 954 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Sestd1Q80UK0 696 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 Trim9Q8C7M3 817 aa13.09□□□□□ -0.31
Trim35-201ENSMUST00000022623 ErmardE9Q048 622 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 OatP29758 439 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Dcaf17Q3TUL7 519 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Fbxo28Q8BIG4 368 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Atp1a1Q8VDN2 1023 aaKnown RBP13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Acot3Q9QYR7 432 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Gm28042B7ZCM9 1014 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Gm4307E9PZY4 289 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Gm4312K9J7E2 289 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Klrk1O54709 232 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Hmgb1P63158 215 aaKnown RBP13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Capza3P70190 299 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Tigd5Q499M4 642 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Q66JV7 365 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Dhx37Q6NZL1 1150 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Asnsd1Q8BFS9 627 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Morc2bQ8C5W4 1022 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Mmtag2Q99LX5 260 aaKnown RBP13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Arl6ip4Q9JM93 229 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Mageb2A2AHM0 380 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 CnpP16330 420 aa13.08□□□□□ -0.32
Trim35-201ENSMUST00000022623 Vcam1P29533 739 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms