RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W HAT2P39984 401 aa3.59□□□□□ -1.83
MSD1YPL104W YIL161WP40449 235 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W UBP7P40453 1071 aa3.59□□□□□ -1.83
MSD1YPL104W RLP7P40693 322 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W AXL1P40851 1208 aa3.59□□□□□ -1.83
MSD1YPL104W LEM3P42838 414 aa3.59□□□□□ -1.83
MSD1YPL104W ILM1P47155 203 aa3.59□□□□□ -1.83
MSD1YPL104W SAP4P53036 818 aa3.59□□□□□ -1.83
MSD1YPL104W USE1P53146 245 aa3.59□□□□□ -1.83
MSD1YPL104W ELA1P53861 379 aaPredicted RBP3.59□□□□□ -1.83
MSD1YPL104W REG1Q00816 1014 aa3.59□□□□□ -1.83
MSD1YPL104W TOF2Q02208 771 aa3.59□□□□□ -1.83
MSD1YPL104W YMR265CQ03508 461 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W TY1A-DR2Q03964 440 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W CSN9Q03981 162 aa3.59□□□□□ -1.83
MSD1YPL104W SEC10Q06245 871 aa3.59□□□□□ -1.83
MSD1YPL104W HSF1P10961 833 aa3.58□□□□□ -1.84
MSD1YPL104W GLN4P13188 809 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W DIT1P21623 536 aa3.58□□□□□ -1.84
MSD1YPL104W EMC1P25574 760 aa3.58□□□□□ -1.84
MSD1YPL104W DBF20P32328 564 aa3.58□□□□□ -1.84
MSD1YPL104W CUE2P36075 443 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W CTP1P38152 299 aa3.58□□□□□ -1.84
MSD1YPL104W SAF1P38352 637 aa3.58□□□□□ -1.84
MSD1YPL104W YHR131CP38835 850 aa3.58□□□□□ -1.84
MSD1YPL104W GIP2P40036 548 aa3.58□□□□□ -1.84
MSD1YPL104W DOT6P40059 670 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W RGI2P40188 164 aa3.58□□□□□ -1.84
MSD1YPL104W NIT3P49954 291 aa3.58□□□□□ -1.84
MSD1YPL104W AMA1P50082 593 aa3.58□□□□□ -1.84
MSD1YPL104W AIF1P52923 378 aa3.58□□□□□ -1.84
MSD1YPL104W YTP1P53584 459 aa3.58□□□□□ -1.84
MSD1YPL104W SPP2Q02521 185 aa3.58□□□□□ -1.84
MSD1YPL104W YMR206WQ03695 313 aa3.58□□□□□ -1.84
MSD1YPL104W YMR155WQ03795 547 aa3.58□□□□□ -1.84
MSD1YPL104W RSA3Q05942 220 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W ENT4Q07872 247 aa3.58□□□□□ -1.84
MSD1YPL104W YOL019WQ08157 551 aa3.58□□□□□ -1.84
MSD1YPL104W NUS1Q12063 375 aa3.58□□□□□ -1.84
MSD1YPL104W MDY2Q12285 212 aa3.58□□□□□ -1.84
MSD1YPL104W RRP36Q12481 300 aaPredicted RBP3.58□□□□□ -1.84
MSD1YPL104W RMD5Q12508 421 aa3.58□□□□□ -1.84
MSD1YPL104W YLR149CQ99296 730 aa3.58□□□□□ -1.84
MSD1YPL104W UBR1P19812 1950 aa3.58□□□□□ -1.84
MSD1YPL104W RPB4P20433 221 aaPredicted RBP3.58□□□□□ -1.84
MSD1YPL104W DAL81P21657 970 aa3.58□□□□□ -1.84
MSD1YPL104W SEC15P22224 910 aa3.58□□□□□ -1.84
MSD1YPL104W PPH22P23595 377 aa3.58□□□□□ -1.84
MSD1YPL104W RBK1P25332 333 aa3.58□□□□□ -1.84
MSD1YPL104W GFD2P25370 566 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W PEX34P25584 144 aa3.58□□□□□ -1.84
MSD1YPL104W YCR099CP25657 155 aa3.58□□□□□ -1.84
MSD1YPL104W RAD14P28519 371 aa3.58□□□□□ -1.84
MSD1YPL104W MF(ALPHA)2P32435 120 aa3.58□□□□□ -1.84
MSD1YPL104W SPR1P32603 445 aa3.58□□□□□ -1.84
MSD1YPL104W BCK2P33306 851 aa3.58□□□□□ -1.84
MSD1YPL104W SIP2P34164 415 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W NUP120P35729 1037 aa3.58□□□□□ -1.84
MSD1YPL104W LDB7P38210 180 aa3.58□□□□□ -1.84
MSD1YPL104W BZZ1P38822 633 aa3.58□□□□□ -1.84
MSD1YPL104W STN1P38960 494 aa3.58□□□□□ -1.84
MSD1YPL104W SEC31P38968 1273 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W ALG5P40350 334 aa3.58□□□□□ -1.84
MSD1YPL104W ECM9Q02202 377 aa3.58□□□□□ -1.84
MSD1YPL104W YPL014WQ02606 381 aa3.58□□□□□ -1.84
MSD1YPL104W YML131WQ03102 365 aa3.58□□□□□ -1.84
MSD1YPL104W NSE5Q03718 556 aa3.58□□□□□ -1.84
MSD1YPL104W YDR131CQ03899 556 aa3.58□□□□□ -1.84
MSD1YPL104W GSF2Q04697 403 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W CRN1Q06440 651 aa3.58□□□□□ -1.84
MSD1YPL104W NBA1Q08229 501 aaKnown RBP3.58□□□□□ -1.84
MSD1YPL104W DIA2Q08496 732 aaPredicted RBP3.58□□□□□ -1.84
MSD1YPL104W PEX11Q12462 236 aa3.58□□□□□ -1.84
MSD1YPL104W STE2D6VTK4 431 aa3.57□□□□□ -1.84
MSD1YPL104W ENA1P13587 1091 aa3.57□□□□□ -1.84
MSD1YPL104W ABF1P14164 731 aa3.57□□□□□ -1.84
MSD1YPL104W AMD1P15274 810 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W ERS1P17261 260 aa3.57□□□□□ -1.84
MSD1YPL104W REC107P21651 314 aa3.57□□□□□ -1.84
MSD1YPL104W GEX1P25596 615 aa3.57□□□□□ -1.84
MSD1YPL104W YCR090CP25654 182 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W SYN8P31377 255 aa3.57□□□□□ -1.84
MSD1YPL104W GEX2P36173 615 aa3.57□□□□□ -1.84
MSD1YPL104W SRP72P38688 640 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W MUP3P38734 546 aa3.57□□□□□ -1.84
MSD1YPL104W UTP9P38882 575 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W YHB1P39676 399 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W EXO1P39875 702 aa3.57□□□□□ -1.84
MSD1YPL104W ALG8P40351 577 aa3.57□□□□□ -1.84
MSD1YPL104W TED1P40533 473 aa3.57□□□□□ -1.84
MSD1YPL104W PRM2P40534 656 aa3.57□□□□□ -1.84
MSD1YPL104W TES1P41903 349 aaKnown RBP3.57□□□□□ -1.84
MSD1YPL104W YFL054CP43549 646 aa3.57□□□□□ -1.84
MSD1YPL104W SIP4P46954 829 aa3.57□□□□□ -1.84
MSD1YPL104W GCD14P46959 383 aaPredicted RBP3.57□□□□□ -1.84
MSD1YPL104W UBC9P50623 157 aaPredicted RBP3.57□□□□□ -1.84
MSD1YPL104W NUP84P52891 726 aa3.57□□□□□ -1.84
MSD1YPL104W COG1P53079 417 aa3.57□□□□□ -1.84
MSD1YPL104W BOL2P53082 120 aa3.57□□□□□ -1.84
MSD1YPL104W CUS2P53830 285 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms