RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MUP3P38734 546 aa2.36□□□□□ -2.03
VPS16YPL045W SAP1P39955 897 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W PHM8P40025 321 aa2.36□□□□□ -2.03
VPS16YPL045W FAR3P46671 204 aa2.36□□□□□ -2.03
VPS16YPL045W SMC3P47037 1230 aa2.36□□□□□ -2.03
VPS16YPL045W MNP1P53163 194 aaPredicted RBP2.36□□□□□ -2.03
VPS16YPL045W COG2P53271 262 aa2.36□□□□□ -2.03
VPS16YPL045W COQ6P53318 479 aa2.36□□□□□ -2.03
VPS16YPL045W YDR179W-AQ03983 463 aa2.36□□□□□ -2.03
VPS16YPL045W PDS5Q04264 1277 aa2.36□□□□□ -2.03
VPS16YPL045W TAP42Q04372 366 aa2.36□□□□□ -2.03
VPS16YPL045W UAF30Q08747 228 aa2.36□□□□□ -2.03
VPS16YPL045W NTO1Q12311 748 aa2.36□□□□□ -2.03
VPS16YPL045W PSY3Q12318 242 aa2.36□□□□□ -2.03
VPS16YPL045W YDL007C-AQ2V2Q0 85 aa2.36□□□□□ -2.03
VPS16YPL045W TY3B-GQ99315 1547 aa2.35□□□□□ -2.03
VPS16YPL045W LPD1P09624 499 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W WHI2P12611 486 aa2.35□□□□□ -2.03
VPS16YPL045W PRP6P19735 899 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W GAS1P22146 559 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W RRP43P25359 394 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W YME1P32795 747 aa2.35□□□□□ -2.03
VPS16YPL045W NIP100P33420 868 aa2.35□□□□□ -2.03
VPS16YPL045W GMH1P36125 273 aa2.35□□□□□ -2.03
VPS16YPL045W OMA1P36163 345 aa2.35□□□□□ -2.03
VPS16YPL045W SLM4P38247 162 aa2.35□□□□□ -2.03
VPS16YPL045W MSR1P38714 643 aa2.35□□□□□ -2.03
VPS16YPL045W PKP1P40530 394 aa2.35□□□□□ -2.03
VPS16YPL045W YGR127WP53275 312 aa2.35□□□□□ -2.03
VPS16YPL045W SMX3P54999 86 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W PCL8Q08966 492 aa2.35□□□□□ -2.03
VPS16YPL045W VPS54Q12071 889 aa2.35□□□□□ -2.03
VPS16YPL045W LEU9Q12166 604 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W DNF2Q12675 1612 aa2.35□□□□□ -2.03
VPS16YPL045W YML133CQ03099 1374 aa2.35□□□□□ -2.03
VPS16YPL045W YLL067CQ07888 1374 aa2.35□□□□□ -2.03
VPS16YPL045W YLL066CQ99208 1374 aa2.35□□□□□ -2.03
VPS16YPL045W SEC7P11075 2009 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W PPH22P23595 377 aa2.35□□□□□ -2.03
VPS16YPL045W PHO84P25297 587 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W SPB1P25582 841 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W MSP1P28737 362 aa2.35□□□□□ -2.03
VPS16YPL045W MRPL9P31334 269 aa2.35□□□□□ -2.03
VPS16YPL045W TUL1P36096 758 aa2.35□□□□□ -2.03
VPS16YPL045W NUP133P36161 1157 aa2.35□□□□□ -2.03
VPS16YPL045W ADE17P38009 592 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W ADH5P38113 351 aaKnown RBP2.35□□□□□ -2.03
VPS16YPL045W YSW1P38280 609 aa2.35□□□□□ -2.03
VPS16YPL045W SUL1P38359 859 aa2.35□□□□□ -2.03
VPS16YPL045W SER3P40054 469 aa2.35□□□□□ -2.03
VPS16YPL045W ATF1P40353 525 aa2.35□□□□□ -2.03
VPS16YPL045W NDC80P40460 691 aa2.35□□□□□ -2.03
VPS16YPL045W ASG1P40467 964 aa2.35□□□□□ -2.03
VPS16YPL045W FMS1P50264 508 aa2.35□□□□□ -2.03
VPS16YPL045W MLC1P53141 149 aa2.35□□□□□ -2.03
VPS16YPL045W YNR068CP53754 272 aa2.35□□□□□ -2.03
VPS16YPL045W WAR1Q03631 944 aa2.35□□□□□ -2.03
VPS16YPL045W HRD3Q05787 833 aa2.35□□□□□ -2.03
VPS16YPL045W PML1Q07930 204 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W AIM39Q08223 395 aa2.35□□□□□ -2.03
VPS16YPL045W CFT2Q12102 859 aaPredicted RBP2.35□□□□□ -2.03
VPS16YPL045W ZPS1Q12512 249 aa2.35□□□□□ -2.03
VPS16YPL045W PDR10P51533 1564 aa2.34□□□□□ -2.03
VPS16YPL045W HIP1P06775 603 aa2.34□□□□□ -2.03
VPS16YPL045W DAP2P18962 818 aa2.34□□□□□ -2.03
VPS16YPL045W PTC6P25646 442 aa2.34□□□□□ -2.03
VPS16YPL045W HRR25P29295 494 aaKnown RBP2.34□□□□□ -2.03
VPS16YPL045W GSH1P32477 678 aa2.34□□□□□ -2.03
VPS16YPL045W YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.03
VPS16YPL045W TSC10P38342 320 aa2.34□□□□□ -2.03
VPS16YPL045W CBR1P38626 284 aaKnown RBP2.34□□□□□ -2.03
VPS16YPL045W PCL7P40186 285 aa2.34□□□□□ -2.03
VPS16YPL045W ARG2P40360 574 aa2.34□□□□□ -2.03
VPS16YPL045W NET1P47035 1189 aa2.34□□□□□ -2.03
VPS16YPL045W YGR149WP48236 432 aa2.34□□□□□ -2.03
VPS16YPL045W RHO5P53879 331 aaKnown RBP2.34□□□□□ -2.03
VPS16YPL045W GFD1Q04839 188 aaKnown RBP2.34□□□□□ -2.03
VPS16YPL045W COQ9Q05779 260 aa2.34□□□□□ -2.03
VPS16YPL045W FRE3Q08905 711 aa2.34□□□□□ -2.03
VPS16YPL045W CAT8P39113 1433 aa2.34□□□□□ -2.03
VPS16YPL045W TRM3Q07527 1436 aa2.34□□□□□ -2.03
VPS16YPL045W ARO1P08566 1588 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W KRS1P15180 591 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W SPO7P18410 259 aa2.34□□□□□ -2.04
VPS16YPL045W ELO2P25358 347 aa2.34□□□□□ -2.04
VPS16YPL045W THI80P35202 319 aa2.34□□□□□ -2.04
VPS16YPL045W DEF1P35732 738 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W GLG1P36143 616 aa2.34□□□□□ -2.04
VPS16YPL045W TIF4631P39935 952 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W PTR3P43606 678 aa2.34□□□□□ -2.04
VPS16YPL045W STU2P46675 888 aa2.34□□□□□ -2.04
VPS16YPL045W ALT2P52892 507 aa2.34□□□□□ -2.04
VPS16YPL045W YGL117WP53133 265 aa2.34□□□□□ -2.04
VPS16YPL045W MSC1Q03104 513 aa2.34□□□□□ -2.04
VPS16YPL045W ACL4Q03771 387 aa2.34□□□□□ -2.04
VPS16YPL045W DBP9Q06218 594 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W ARO10Q06408 635 aa2.34□□□□□ -2.04
VPS16YPL045W TEN1Q07921 160 aa2.34□□□□□ -2.04
VPS16YPL045W YOL073CQ08232 322 aa2.34□□□□□ -2.04
VPS16YPL045W LEA1Q08963 238 aaPredicted RBP2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms