RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W CAR1P00812 333 aaKnown RBP4.46□□□□□ -1.7
VAM3YOR106W PEP5P12868 1029 aa4.46□□□□□ -1.7
VAM3YOR106W KGD1P20967 1014 aaKnown RBP4.46□□□□□ -1.7
VAM3YOR106W SGF29P25554 259 aa4.46□□□□□ -1.7
VAM3YOR106W SIP2P34164 415 aaKnown RBP4.46□□□□□ -1.7
VAM3YOR106W RPL32P38061 130 aaKnown RBP4.46□□□□□ -1.7
VAM3YOR106W CSM2P40465 213 aa4.46□□□□□ -1.7
VAM3YOR106W YJL213WP40896 331 aa4.46□□□□□ -1.7
VAM3YOR106W YDL186WP48568 277 aa4.46□□□□□ -1.7
VAM3YOR106W YMR087WQ04299 284 aa4.46□□□□□ -1.7
VAM3YOR106W GDH1P07262 454 aaKnown RBP4.45□□□□□ -1.7
VAM3YOR106W CHS3P29465 1165 aa4.45□□□□□ -1.7
VAM3YOR106W SSH4P32343 579 aa4.45□□□□□ -1.7
VAM3YOR106W SSE2P32590 693 aaKnown RBP4.45□□□□□ -1.7
VAM3YOR106W YBR139WP38109 508 aa4.45□□□□□ -1.7
VAM3YOR106W RPH1P39956 796 aa4.45□□□□□ -1.7
VAM3YOR106W LYS14P40971 790 aa4.45□□□□□ -1.7
VAM3YOR106W ALT2P52892 507 aa4.45□□□□□ -1.7
VAM3YOR106W YGR126WP53274 230 aa4.45□□□□□ -1.7
VAM3YOR106W LUC7Q07508 261 aaPredicted RBP4.45□□□□□ -1.7
VAM3YOR106W APE1P14904 514 aa4.44□□□□□ -1.7
VAM3YOR106W YBR144CP34215 104 aa4.44□□□□□ -1.7
VAM3YOR106W YBP1P38315 674 aa4.44□□□□□ -1.7
VAM3YOR106W YFR016CP43597 1233 aaKnown RBP4.44□□□□□ -1.7
VAM3YOR106W ERP1Q05359 219 aaKnown RBP4.44□□□□□ -1.7
VAM3YOR106W FMP40Q08968 688 aaPredicted RBP4.44□□□□□ -1.7
VAM3YOR106W RPL19AP0CX82 189 aaKnown RBP4.43□□□□□ -1.7
VAM3YOR106W RPL19BP0CX83 189 aaPredicted RBP4.43□□□□□ -1.7
VAM3YOR106W YCK1P23291 538 aa4.43□□□□□ -1.7
VAM3YOR106W POL4P25615 582 aa4.43□□□□□ -1.7
VAM3YOR106W ATS1P31386 333 aa4.43□□□□□ -1.7
VAM3YOR106W LOS1P33418 1100 aaPredicted RBP4.43□□□□□ -1.7
VAM3YOR106W UBP11P36026 717 aa4.43□□□□□ -1.7
VAM3YOR106W OSH3P38713 996 aaKnown RBP4.43□□□□□ -1.7
VAM3YOR106W CIN4P39110 191 aa4.43□□□□□ -1.7
VAM3YOR106W VPS52P39904 641 aa4.43□□□□□ -1.7
VAM3YOR106W APT1P49435 187 aaKnown RBP4.43□□□□□ -1.7
VAM3YOR106W MEP3P53390 489 aa4.43□□□□□ -1.7
VAM3YOR106W YDL057WQ07379 328 aa4.43□□□□□ -1.7
VAM3YOR106W SPC110P32380 944 aa4.42□□□□□ -1.7
VAM3YOR106W YEL068CP39977 110 aa4.42□□□□□ -1.7
VAM3YOR106W RPR2P40571 144 aa4.42□□□□□ -1.7
VAM3YOR106W DSD1P53095 428 aa4.42□□□□□ -1.7
VAM3YOR106W BUD32P53323 261 aa4.42□□□□□ -1.7
VAM3YOR106W RSA1Q08932 381 aa4.42□□□□□ -1.7
VAM3YOR106W HUA2Q12134 243 aa4.42□□□□□ -1.7
VAM3YOR106W YBR126W-AQ8TGU7 68 aa4.42□□□□□ -1.7
VAM3YOR106W CDC16P09798 840 aa4.41□□□□□ -1.7
VAM3YOR106W RPL20AP0CX23 172 aaKnown RBP4.41□□□□□ -1.7
VAM3YOR106W RPL20BP0CX24 172 aaPredicted RBP4.41□□□□□ -1.7
VAM3YOR106W CBS2P14905 389 aa4.41□□□□□ -1.7
VAM3YOR106W KAR3P17119 729 aa4.41□□□□□ -1.7
VAM3YOR106W MCK1P21965 375 aaKnown RBP4.41□□□□□ -1.7
VAM3YOR106W AGA1P32323 725 aa4.41□□□□□ -1.7
VAM3YOR106W YOX1P34161 385 aa4.41□□□□□ -1.7
VAM3YOR106W MTC4P38335 694 aaKnown RBP4.41□□□□□ -1.7
VAM3YOR106W NPR2P39923 615 aa4.41□□□□□ -1.7
VAM3YOR106W YJL132WP47014 750 aa4.41□□□□□ -1.7
VAM3YOR106W LCL3P53153 274 aa4.41□□□□□ -1.7
VAM3YOR106W MSC1Q03104 513 aa4.41□□□□□ -1.7
VAM3YOR106W YPL272CQ08984 517 aa4.41□□□□□ -1.7
VAM3YOR106W NOP58Q12499 511 aaKnown RBP4.41□□□□□ -1.7
VAM3YOR106W SGV1P23293 657 aaKnown RBP4.4□□□□□ -1.71
VAM3YOR106W SDS24P38314 527 aa4.4□□□□□ -1.71
VAM3YOR106W YJR154WP47181 346 aa4.4□□□□□ -1.71
VAM3YOR106W COS10P52924 374 aa4.4□□□□□ -1.71
VAM3YOR106W RLI1Q03195 608 aaKnown RBP4.4□□□□□ -1.71
VAM3YOR106W SPE4Q12455 300 aa4.4□□□□□ -1.71
VAM3YOR106W SGS1P35187 1447 aa4.39□□□□□ -1.71
VAM3YOR106W NOP1P15646 327 aaKnown RBP4.39□□□□□ -1.71
VAM3YOR106W MCM10P32354 571 aa4.39□□□□□ -1.71
VAM3YOR106W YHR210CP38893 341 aa4.39□□□□□ -1.71
VAM3YOR106W SCD6P45978 349 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
VAM3YOR106W SYO1Q07395 620 aa4.39□□□□□ -1.71
VAM3YOR106W YDL009CQ12210 107 aa4.39□□□□□ -1.71
VAM3YOR106W AYT1Q12226 474 aa4.39□□□□□ -1.71
VAM3YOR106W ART10P18634 518 aaKnown RBP4.38□□□□□ -1.71
VAM3YOR106W AVT5P38176 459 aa4.38□□□□□ -1.71
VAM3YOR106W DUO1P53168 247 aaKnown RBP4.38□□□□□ -1.71
VAM3YOR106W IVY1Q04934 453 aa4.38□□□□□ -1.71
VAM3YOR106W MRPL51Q06090 140 aaPredicted RBP4.38□□□□□ -1.71
VAM3YOR106W TLG2Q08144 397 aa4.38□□□□□ -1.71
VAM3YOR106W YLL056CQ12177 298 aa4.38□□□□□ -1.71
VAM3YOR106W NCE102Q12207 173 aaRIP-Chip data4.38□□□□□ -1.71not detected
VAM3YOR106W HSH49Q99181 213 aaPredicted RBP4.38□□□□□ -1.71
VAM3YOR106W AMD1P15274 810 aaKnown RBP4.37□□□□□ -1.71
VAM3YOR106W EST1P17214 699 aaPredicted RBP4.37□□□□□ -1.71
VAM3YOR106W MUD2P36084 527 aaKnown RBP4.37□□□□□ -1.71
VAM3YOR106W ALG5P40350 334 aa4.37□□□□□ -1.71
VAM3YOR106W VID30P53076 958 aa4.37□□□□□ -1.71
VAM3YOR106W BOR1P53838 576 aa4.37□□□□□ -1.71
VAM3YOR106W IPI3P53877 555 aa4.37□□□□□ -1.71
VAM3YOR106W YKU80Q04437 629 aa4.37□□□□□ -1.71
VAM3YOR106W YOR365CQ08844 703 aa4.37□□□□□ -1.71
VAM3YOR106W RAD52P06778 471 aaKnown RBP4.36□□□□□ -1.71
VAM3YOR106W YCR007CP25354 239 aa4.36□□□□□ -1.71
VAM3YOR106W FRE1P32791 686 aa4.36□□□□□ -1.71
VAM3YOR106W SEF1P34228 1148 aa4.36□□□□□ -1.71
VAM3YOR106W PMU1P36069 295 aa4.36□□□□□ -1.71
VAM3YOR106W TUL1P36096 758 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms