RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	SHY1	P53266	389 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	RRN9	P53437	365 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	SSU72	P53538	206 aa	Predicted RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	NAF1	P53919	492 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	TGL2	P54857	326 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	CWC27	Q02770	301 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	NGL2	Q03264	515 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	RSN1	Q03516	953 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	GIS4	Q04233	774 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	YLR173W	Q06247	608 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	YDL129W	Q07555	291 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	FRE5	Q08908	694 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	ULA1	Q12059	462 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	WRS1	Q12109	432 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	NTO1	Q12311	748 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	HKR1	P41809	1802 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	FIG2	P25653	1609 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	TUB2	P02557	457 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	GPH1	P06738	902 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	RPL4A	P10664	362 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	PET9	P18239	318 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	MNE1	P24720	663 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	CIN8	P27895	1000 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	DBF4	P32325	704 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	PHA2	P32452	334 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	ERG1	P32476	496 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	MDL1	P33310	695 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	JEN1	P36035	616 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	PTC7	P38797	343 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	FMO1	P38866	432 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	SOP4	P39543	234 aa	Predicted RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	GIP4	P39732	760 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	HXT14	P42833	540 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	COS4	P43542	379 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	COS5	P47187	383 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	ASK10	P48361	1146 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	RPL4B	P49626	362 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	NSA1	P53136	463 aa	Predicted RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	ZPR1	P53303	486 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	COS1	P53822	381 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	ARL3	Q02804	198 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	RNY1	Q02933	434 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	THI7	Q05998	598 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	FAR10	Q06001	478 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	NBA1	Q08229	501 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	YDL176W	Q12027	708 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	MLH3	Q12083	715 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
PWP1	YLR196W	RIB2	Q12362	591 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	RPN6	Q12377	434 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	MDM20	Q12387	796 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	APM4	Q99186	491 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	DFG16	Q99234	619 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	COB	P00163	385 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	CDC8	P00572	216 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	ARG4	P04076	463 aa	Predicted RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	RPP2A	P05319	106 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	PYC1	P11154	1178 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	FBA1	P14540	359 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	GFA1	P14742	717 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	GRX1	P25373	110 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	BOS1	P25385	244 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	EMC1	P25574	760 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	SPT14	P32363	452 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	DAL3	P32459	195 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	SKG1	P36169	355 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	NTC20	P38302	140 aa	Predicted RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	NVJ1	P38881	321 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	RPN3	P40016	523 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	SCC4	P40090	624 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	GAB1	P41733	394 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	YJR154W	P47181	346 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	YGL204C	P53089	101 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	YGR273C	P53329	174 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	SDH1	Q00711	640 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	YPL107W	Q02873	248 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	PEX25	Q02969	394 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	URH1	Q04179	340 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	DLT1	Q04216	342 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	ECM18	Q04623	453 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	CIA1	Q05583	330 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	BOP2	Q06150	570 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	BCP1	Q06338	283 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	HDA3	Q06623	655 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	RCL1	Q08096	367 aa	Predicted RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	REX4	Q08237	289 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	RAX1	Q08760	435 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	TMA46	Q12000	345 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	SPE3	Q12074	293 aa	Known RBP	5.17	□□□□□ -1.58
PWP1	YLR196W	FRE6	Q12473	712 aa		5.17	□□□□□ -1.58
PWP1	YLR196W	MAS1	P10507	462 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	ABF1	P14164	731 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	PRP9	P19736	530 aa	Known RBP	5.16	□□□□□ -1.58
PWP1	YLR196W	AFT1	P22149	690 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
PWP1	YLR196W	ATP7	P30902	174 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	SUA5	P32579	426 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	RPT5	P33297	434 aa	Known RBP	5.16	□□□□□ -1.58
PWP1	YLR196W	BCK2	P33306	851 aa		5.16	□□□□□ -1.58
PWP1	YLR196W	NIC96	P34077	839 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms