RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YBR284WP38150 797 aa5.74□□□□□ -1.49
SSK1YLR006C LYS9P38999 446 aa5.74□□□□□ -1.49
SSK1YLR006C AGE2P40529 298 aa5.74□□□□□ -1.49
SSK1YLR006C CHS6P40955 746 aa5.74□□□□□ -1.49
SSK1YLR006C YJL107CP42947 387 aa5.74□□□□□ -1.49
SSK1YLR006C YFL066CP43538 392 aa5.74□□□□□ -1.49
SSK1YLR006C SIP4P46954 829 aa5.74□□□□□ -1.49
SSK1YLR006C FMP33P46998 180 aa5.74□□□□□ -1.49
SSK1YLR006C ASK10P48361 1146 aa5.74□□□□□ -1.49
SSK1YLR006C RPL4BP49626 362 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C CGR1P53188 120 aa5.74□□□□□ -1.49
SSK1YLR006C NOP15P53927 220 aaPredicted RBP5.74□□□□□ -1.49
SSK1YLR006C MRPL13Q02204 264 aa5.74□□□□□ -1.49
SSK1YLR006C ELP3Q02908 557 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C YDR444WQ04093 687 aa5.74□□□□□ -1.49
SSK1YLR006C RPN5Q12250 445 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C YDR461C-AQ2V2P7 80 aa5.74□□□□□ -1.49
SSK1YLR006C CDC19P00549 500 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C TRP3P00937 484 aa5.74□□□□□ -1.49
SSK1YLR006C FLP1P03870 423 aa5.74□□□□□ -1.49
SSK1YLR006C GAL10P04397 699 aa5.74□□□□□ -1.49
SSK1YLR006C YAK1P14680 807 aa5.74□□□□□ -1.49
SSK1YLR006C MSD1P15179 658 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C RAD14P28519 371 aa5.74□□□□□ -1.49
SSK1YLR006C APN2P38207 520 aa5.74□□□□□ -1.49
SSK1YLR006C FRT2P39734 528 aa5.74□□□□□ -1.49
SSK1YLR006C SCS2P40075 244 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C PRK1P40494 810 aa5.74□□□□□ -1.49
SSK1YLR006C MRX6P48564 524 aa5.74□□□□□ -1.49
SSK1YLR006C YDL183CP48569 320 aa5.74□□□□□ -1.49
SSK1YLR006C GCV2P49095 1034 aa5.74□□□□□ -1.49
SSK1YLR006C ALT2P52892 507 aa5.74□□□□□ -1.49
SSK1YLR006C YGR117CP53270 476 aa5.74□□□□□ -1.49
SSK1YLR006C EGD1Q02642 157 aaKnown RBP5.74□□□□□ -1.49
SSK1YLR006C GIM5Q04493 163 aa5.74□□□□□ -1.49
SSK1YLR006C ATG33Q06485 197 aa5.74□□□□□ -1.49
SSK1YLR006C HDA2Q06629 674 aa5.74□□□□□ -1.49
SSK1YLR006C YPR202WQ08993 238 aa5.74□□□□□ -1.49
SSK1YLR006C VIK1Q12045 647 aa5.74□□□□□ -1.49
SSK1YLR006C ULA1Q12059 462 aa5.74□□□□□ -1.49
SSK1YLR006C SLP1Q12232 587 aa5.74□□□□□ -1.49
SSK1YLR006C TKL1P23254 680 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C RTC3P38804 111 aaPredicted RBP5.73□□□□□ -1.49
SSK1YLR006C PIK1P39104 1066 aa5.73□□□□□ -1.49
SSK1YLR006C HMF1P40037 129 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C PDS1P40316 373 aaPredicted RBP5.73□□□□□ -1.49
SSK1YLR006C ALK1P43633 760 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C GCD14P46959 383 aaPredicted RBP5.73□□□□□ -1.49
SSK1YLR006C ZAP1P47043 880 aa5.73□□□□□ -1.49
SSK1YLR006C PUS2P53167 370 aa5.73□□□□□ -1.49
SSK1YLR006C NMA111P53920 997 aa5.73□□□□□ -1.49
SSK1YLR006C RNY1Q02933 434 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C SLD5Q03406 294 aa5.73□□□□□ -1.49
SSK1YLR006C YMR160WQ03823 816 aa5.73□□□□□ -1.49
SSK1YLR006C RSA3Q05942 220 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C FMP45Q07651 309 aa5.73□□□□□ -1.49
SSK1YLR006C HBT1Q07653 1046 aaKnown RBP5.73□□□□□ -1.49
SSK1YLR006C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
SSK1YLR006C PFK27Q12471 397 aaPredicted RBP5.73□□□□□ -1.49
SSK1YLR006C ZPS1Q12512 249 aa5.73□□□□□ -1.49
SSK1YLR006C CMC2Q3E7A4 109 aa5.73□□□□□ -1.49
SSK1YLR006C SUI3P09064 285 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C PDC5P16467 563 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C HXT3P32466 567 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C GDH2P33327 1092 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C DUR3P33413 735 aa5.72□□□□□ -1.49
SSK1YLR006C AST1P35183 429 aa5.72□□□□□ -1.49
SSK1YLR006C OCT1P35999 772 aa5.72□□□□□ -1.49
SSK1YLR006C RMA1P36001 430 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C YPT52P36018 234 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C SWC5P38326 303 aa5.72□□□□□ -1.49
SSK1YLR006C YHR182WP38870 785 aa5.72□□□□□ -1.49
SSK1YLR006C SHU2P38957 223 aa5.72□□□□□ -1.49
SSK1YLR006C YEL025CP39991 1188 aa5.72□□□□□ -1.49
SSK1YLR006C PEP8P40335 379 aa5.72□□□□□ -1.49
SSK1YLR006C YIL089WP40500 205 aa5.72□□□□□ -1.49
SSK1YLR006C MAM33P40513 266 aa5.72□□□□□ -1.49
SSK1YLR006C YIL054WP40524 105 aa5.72□□□□□ -1.49
SSK1YLR006C ASG7P46993 209 aa5.72□□□□□ -1.49
SSK1YLR006C TAH11P47112 604 aa5.72□□□□□ -1.49
SSK1YLR006C ALT1P52893 592 aa5.72□□□□□ -1.49
SSK1YLR006C YGL036WP53185 909 aaPredicted RBP5.72□□□□□ -1.49
SSK1YLR006C IST1P53843 298 aaPredicted RBP5.72□□□□□ -1.49
SSK1YLR006C RKM2Q03942 479 aa5.72□□□□□ -1.49
SSK1YLR006C PDR8Q06149 701 aa5.72□□□□□ -1.49
SSK1YLR006C AAD15Q08361 143 aa5.72□□□□□ -1.49
SSK1YLR006C ERP3Q12403 225 aa5.72□□□□□ -1.49
SSK1YLR006C CSR2Q12734 1121 aa5.72□□□□□ -1.49
SSK1YLR006C GCN4P03069 281 aa5.72□□□□□ -1.49
SSK1YLR006C IMA3P0CW40 589 aa5.72□□□□□ -1.49
SSK1YLR006C IMA4P0CW41 589 aa5.72□□□□□ -1.49
SSK1YLR006C ASP3-2P0CX77 362 aa5.72□□□□□ -1.49
SSK1YLR006C ASP3-3P0CX78 362 aa5.72□□□□□ -1.49
SSK1YLR006C ASP3-4P0CX79 362 aa5.72□□□□□ -1.49
SSK1YLR006C ASP3-1P0CZ17 362 aa5.72□□□□□ -1.49
SSK1YLR006C TAL1P15019 335 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C MF(ALPHA)2P32435 120 aa5.72□□□□□ -1.49
SSK1YLR006C SLA2P33338 968 aa5.72□□□□□ -1.49
SSK1YLR006C PHO89P38361 574 aa5.72□□□□□ -1.49
SSK1YLR006C MSC7P38694 644 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms