RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C GPI17Q04080 534 aa11.88□□□□□ -0.51
SDH1YKL148C YMR111CQ04461 462 aaPredicted RBP11.88□□□□□ -0.51
SDH1YKL148C ENT2Q05785 613 aa11.88□□□□□ -0.51
SDH1YKL148C YLL032CQ07834 825 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
SDH1YKL148C REP1P03871 373 aa11.88□□□□□ -0.51
SDH1YKL148C TPK3P05986 398 aa11.88□□□□□ -0.51
SDH1YKL148C CBS2P14905 389 aa11.88□□□□□ -0.51
SDH1YKL148C YAP1P19880 650 aaKnown RBP11.88□□□□□ -0.51
SDH1YKL148C NUF2P33895 451 aa11.88□□□□□ -0.51
SDH1YKL148C PEX18P38855 283 aa11.88□□□□□ -0.51
SDH1YKL148C EGD2P38879 174 aaKnown RBP11.88□□□□□ -0.51
SDH1YKL148C SIT1P39980 628 aa11.88□□□□□ -0.51
SDH1YKL148C BST1P43571 1029 aa11.88□□□□□ -0.51
SDH1YKL148C SHY1P53266 389 aa11.88□□□□□ -0.51
SDH1YKL148C KRE28Q04431 385 aa11.88□□□□□ -0.51
SDH1YKL148C YHC1Q05900 231 aaKnown RBP11.88□□□□□ -0.51
SDH1YKL148C RPS9AO13516 197 aaKnown RBP11.87□□□□□ -0.51
SDH1YKL148C HTA2P04912 132 aa11.87□□□□□ -0.51
SDH1YKL148C RAD7P06779 565 aa11.87□□□□□ -0.51
SDH1YKL148C RBK1P25332 333 aa11.87□□□□□ -0.51
SDH1YKL148C NTG1P31378 399 aa11.87□□□□□ -0.51
SDH1YKL148C PEP7P32609 515 aa11.87□□□□□ -0.51
SDH1YKL148C YHR202WP38887 602 aa11.87□□□□□ -0.51
SDH1YKL148C YEL023CP39992 682 aa11.87□□□□□ -0.51
SDH1YKL148C RGI1P40043 161 aaPredicted RBP11.87□□□□□ -0.51
SDH1YKL148C GCD10P41814 478 aa11.87□□□□□ -0.51
SDH1YKL148C NUP85P46673 744 aa11.87□□□□□ -0.51
SDH1YKL148C YGL176CP46945 554 aa11.87□□□□□ -0.51
SDH1YKL148C GTO1P48239 356 aa11.87□□□□□ -0.51
SDH1YKL148C YNR068CP53754 272 aa11.87□□□□□ -0.51
SDH1YKL148C BNI4P53858 892 aa11.87□□□□□ -0.51
SDH1YKL148C YOR131CQ12486 218 aa11.87□□□□□ -0.51
SDH1YKL148C HXK2P04807 486 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C RPS4AP0CX35 261 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C RPS4BP0CX36 261 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C MET22P32179 357 aa11.86□□□□□ -0.51
SDH1YKL148C MTW1P39731 289 aa11.86□□□□□ -0.51
SDH1YKL148C TES1P41903 349 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C TY4A-JP47023 414 aa11.86□□□□□ -0.51
SDH1YKL148C PRP24P49960 444 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C YPT32P51996 222 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C ESF2P53743 316 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C YDR132CQ03900 495 aa11.86□□□□□ -0.51
SDH1YKL148C HRK1Q08732 759 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C MED11Q99278 115 aa11.86□□□□□ -0.51
SDH1YKL148C TEC1P18412 486 aa11.86□□□□□ -0.51
SDH1YKL148C ARP2P32381 391 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C CDC5P32562 705 aa11.86□□□□□ -0.51
SDH1YKL148C LDB7P38210 180 aa11.86□□□□□ -0.51
SDH1YKL148C GND1P38720 489 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C KRE29P40026 464 aa11.86□□□□□ -0.51
SDH1YKL148C RMD8P43620 662 aa11.86□□□□□ -0.51
SDH1YKL148C VPS25P47142 202 aa11.86□□□□□ -0.51
SDH1YKL148C SWP1Q02795 286 aa11.86□□□□□ -0.51
SDH1YKL148C TLG1Q03322 224 aa11.86□□□□□ -0.51
SDH1YKL148C RPN4Q03465 531 aa11.86□□□□□ -0.51
SDH1YKL148C YDR124WQ04608 324 aa11.86□□□□□ -0.51
SDH1YKL148C GSF2Q04697 403 aaKnown RBP11.86□□□□□ -0.51
SDH1YKL148C NTG2Q08214 380 aa11.86□□□□□ -0.51
SDH1YKL148C YOR389WQ08912 624 aa11.86□□□□□ -0.51
SDH1YKL148C NUP2P32499 720 aa11.85□□□□□ -0.51
SDH1YKL148C YKL100CP34248 587 aa11.85□□□□□ -0.51
SDH1YKL148C YPK3P38070 525 aa11.85□□□□□ -0.51
SDH1YKL148C AYR1P40471 297 aa11.85□□□□□ -0.51
SDH1YKL148C ORC3P54790 616 aa11.85□□□□□ -0.51
SDH1YKL148C MRN1Q08925 612 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
SDH1YKL148C RPN6Q12377 434 aa11.85□□□□□ -0.51
SDH1YKL148C MET17P06106 444 aa11.84□□□□□ -0.51
SDH1YKL148C SPT3P06844 337 aa11.84□□□□□ -0.51
SDH1YKL148C IDI1P15496 288 aa11.84□□□□□ -0.51
SDH1YKL148C UBA1P22515 1024 aaKnown RBP11.84□□□□□ -0.51
SDH1YKL148C OCA4P25366 362 aa11.84□□□□□ -0.51
SDH1YKL148C YBR139WP38109 508 aa11.84□□□□□ -0.51
SDH1YKL148C STB2P46679 850 aa11.84□□□□□ -0.51
SDH1YKL148C EFR3Q03653 782 aaKnown RBP11.84□□□□□ -0.51
SDH1YKL148C YMR010WQ03687 405 aa11.84□□□□□ -0.51
SDH1YKL148C NUT2Q06213 157 aa11.84□□□□□ -0.51
SDH1YKL148C MCP2Q06567 569 aa11.84□□□□□ -0.51
SDH1YKL148C FMP45Q07651 309 aa11.84□□□□□ -0.51
SDH1YKL148C MAM3Q12296 706 aa11.84□□□□□ -0.51
SDH1YKL148C MHF2Q3E829 80 aa11.84□□□□□ -0.51
SDH1YKL148C TSA1P34760 196 aaKnown RBP11.84□□□□□ -0.51
SDH1YKL148C ECM8P38246 354 aa11.84□□□□□ -0.51
SDH1YKL148C TIS11P47977 285 aa11.84□□□□□ -0.51
SDH1YKL148C ECM11Q04110 302 aa11.84□□□□□ -0.51
SDH1YKL148C GPH1P06738 902 aaKnown RBP11.83□□□□□ -0.52
SDH1YKL148C CAD1P24813 409 aaKnown RBP11.83□□□□□ -0.52
SDH1YKL148C VPH1P32563 840 aaKnown RBP11.83□□□□□ -0.52
SDH1YKL148C MPT5P39016 859 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
SDH1YKL148C COG1P53079 417 aa11.83□□□□□ -0.52
SDH1YKL148C SLD3P53135 668 aa11.83□□□□□ -0.52
SDH1YKL148C HER2Q03557 464 aa11.83□□□□□ -0.52
SDH1YKL148C YLR012CQ07927 99 aa11.83□□□□□ -0.52
SDH1YKL148C PUS7Q08647 676 aaKnown RBP11.83□□□□□ -0.52
SDH1YKL148C TIF6Q12522 245 aaKnown RBP11.83□□□□□ -0.52
SDH1YKL148C GBP2P25555 427 aaKnown RBP RIP-Chip data11.82□□□□□ -0.52not detected
SDH1YKL148C BUD23P25627 275 aaPredicted RBP11.82□□□□□ -0.52
SDH1YKL148C PPZ1P26570 692 aa11.82□□□□□ -0.52
SDH1YKL148C YKR051WP36142 418 aa11.82□□□□□ -0.52
SDH1YKL148C YJL055WP47044 245 aa11.82□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms