RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YML122CQ03207 126 aa6.74□□□□□ -1.33
LCP5YER127W MCP2Q06567 569 aa6.74□□□□□ -1.33
LCP5YER127W ECM30Q06673 1274 aa6.74□□□□□ -1.33
LCP5YER127W BUD7Q08754 746 aa6.74□□□□□ -1.33
LCP5YER127W FMP40Q08968 688 aaPredicted RBP6.74□□□□□ -1.33
LCP5YER127W YLR112WQ12130 139 aa6.74□□□□□ -1.33
LCP5YER127W YJR112W-AQ3E743 109 aa6.74□□□□□ -1.33
LCP5YER127W RPS24AP0CX31 135 aaKnown RBP6.73□□□□□ -1.33
LCP5YER127W RPS24BP0CX32 135 aaKnown RBP6.73□□□□□ -1.33
LCP5YER127W SSE2P32590 693 aaKnown RBP6.73□□□□□ -1.33
LCP5YER127W YBR144CP34215 104 aa6.73□□□□□ -1.33
LCP5YER127W ICS2P38284 255 aa6.73□□□□□ -1.33
LCP5YER127W TSC10P38342 320 aa6.73□□□□□ -1.33
LCP5YER127W FAR3P46671 204 aa6.73□□□□□ -1.33
LCP5YER127W YGR127WP53275 312 aa6.73□□□□□ -1.33
LCP5YER127W ARP10Q04549 284 aa6.73□□□□□ -1.33
LCP5YER127W URB1P34241 1764 aaKnown RBP6.72□□□□□ -1.33
LCP5YER127W TY4B-HP0C2J7 1802 aa6.72□□□□□ -1.33
LCP5YER127W TY4B-JP47024 1803 aa6.72□□□□□ -1.33
LCP5YER127W PGS1P25578 521 aa6.72□□□□□ -1.33
LCP5YER127W IMG1P25626 169 aa6.72□□□□□ -1.33
LCP5YER127W MIA40P36046 403 aa6.72□□□□□ -1.33
LCP5YER127W SRO77P38163 1010 aa6.72□□□□□ -1.33
LCP5YER127W VID30P53076 958 aa6.72□□□□□ -1.33
LCP5YER127W ATX2Q12067 313 aa6.72□□□□□ -1.33
LCP5YER127W YPR089WO13585 888 aa6.71□□□□□ -1.34
LCP5YER127W ARG81P05085 880 aa6.71□□□□□ -1.34
LCP5YER127W OCA4P25366 362 aa6.71□□□□□ -1.34
LCP5YER127W CCT6P39079 546 aa6.71□□□□□ -1.34
LCP5YER127W YMR124WP39523 943 aaKnown RBP6.71□□□□□ -1.34
LCP5YER127W SPO22P40511 975 aa6.71□□□□□ -1.34
LCP5YER127W YIL060WP40519 144 aa6.71□□□□□ -1.34
LCP5YER127W SGN1P40561 250 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
LCP5YER127W SRB7P47822 140 aa6.71□□□□□ -1.34
LCP5YER127W LYS20P48570 428 aaKnown RBP6.71□□□□□ -1.34
LCP5YER127W ERG26P53199 349 aaKnown RBP6.71□□□□□ -1.34
LCP5YER127W YGR066CP53242 292 aa6.71□□□□□ -1.34
LCP5YER127W IPI3P53877 555 aa6.71□□□□□ -1.34
LCP5YER127W VPS38Q05919 439 aa6.71□□□□□ -1.34
LCP5YER127W UTP21Q06078 939 aaPredicted RBP6.71□□□□□ -1.34
LCP5YER127W ATG26Q06321 1198 aa6.71□□□□□ -1.34
LCP5YER127W HER1Q12276 1246 aa6.71□□□□□ -1.34
LCP5YER127W YER190C-BP0CX94 160 aa6.7□□□□□ -1.34
LCP5YER127W YEL077W-AP0CX95 160 aa6.7□□□□□ -1.34
LCP5YER127W YGR296C-BP0CX96 160 aa6.7□□□□□ -1.34
LCP5YER127W YPL283W-BP0CX97 160 aa6.7□□□□□ -1.34
LCP5YER127W YPR204C-AP0CX98 160 aa6.7□□□□□ -1.34
LCP5YER127W PUP3P25451 205 aaKnown RBP6.7□□□□□ -1.34
LCP5YER127W SEF1P34228 1148 aa6.7□□□□□ -1.34
LCP5YER127W HXT9P40885 567 aa6.7□□□□□ -1.34
LCP5YER127W IRC6P43615 237 aa6.7□□□□□ -1.34
LCP5YER127W RSM23Q01163 450 aa6.7□□□□□ -1.34
LCP5YER127W CAC2Q04199 468 aa6.7□□□□□ -1.34
LCP5YER127W CBP1P07252 654 aa6.69□□□□□ -1.34
LCP5YER127W BOS1P25385 244 aa6.69□□□□□ -1.34
LCP5YER127W SYN8P31377 255 aa6.69□□□□□ -1.34
LCP5YER127W ECM32P32644 1121 aaKnown RBP6.69□□□□□ -1.34
LCP5YER127W ALG5P40350 334 aa6.69□□□□□ -1.34
LCP5YER127W YNL234WP53857 426 aa6.69□□□□□ -1.34
LCP5YER127W GSH2Q08220 491 aa6.69□□□□□ -1.34
LCP5YER127W RPS10AQ08745 105 aaPredicted RBP6.69□□□□□ -1.34
LCP5YER127W GAL80P04387 435 aa6.68□□□□□ -1.34
LCP5YER127W MET17P06106 444 aa6.68□□□□□ -1.34
LCP5YER127W SNF3P10870 884 aa6.68□□□□□ -1.34
LCP5YER127W MRP13P12686 339 aa6.68□□□□□ -1.34
LCP5YER127W CKA1P15790 372 aa6.68□□□□□ -1.34
LCP5YER127W YBL055CP34220 418 aaPredicted RBP6.68□□□□□ -1.34
LCP5YER127W GAT1P43574 510 aa6.68□□□□□ -1.34
LCP5YER127W RPL15BP54780 204 aaPredicted RBP6.68□□□□□ -1.34
LCP5YER127W IZH1Q03419 316 aa6.68□□□□□ -1.34
LCP5YER127W MRPL1Q04599 285 aa6.68□□□□□ -1.34
LCP5YER127W ADE13Q05911 482 aaKnown RBP6.68□□□□□ -1.34
LCP5YER127W YDL218WQ07629 317 aa6.68□□□□□ -1.34
LCP5YER127W RTT109Q07794 436 aa6.68□□□□□ -1.34
LCP5YER127W HSH49Q99181 213 aaPredicted RBP6.68□□□□□ -1.34
LCP5YER127W FOB1O13329 566 aa6.67□□□□□ -1.34
LCP5YER127W TIF3P34167 436 aaKnown RBP6.67□□□□□ -1.34
LCP5YER127W YIR016WP40572 265 aa6.67□□□□□ -1.34
LCP5YER127W RPS10BP46784 105 aaKnown RBP6.67□□□□□ -1.34
LCP5YER127W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
LCP5YER127W AVL9Q12500 764 aa6.67□□□□□ -1.34
LCP5YER127W DFR1P07807 211 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
LCP5YER127W RPL42AP0CX27 106 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W RPL42BP0CX28 106 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W PDA1P16387 420 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W ART10P18634 518 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W AIM17P23180 465 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W GAC1P28006 793 aa6.66□□□□□ -1.34
LCP5YER127W RPL32P38061 130 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W ROT2P38138 954 aa6.66□□□□□ -1.34
LCP5YER127W YEL057CP39983 233 aa6.66□□□□□ -1.34
LCP5YER127W IMD4P50094 524 aaKnown RBP6.66□□□□□ -1.34
LCP5YER127W HOS2P53096 452 aaPredicted RBP6.66□□□□□ -1.34
LCP5YER127W YDR239CQ03780 787 aa6.66□□□□□ -1.34
LCP5YER127W YLR287CQ05881 355 aa6.66□□□□□ -1.34
LCP5YER127W RDR1Q08904 546 aa6.66□□□□□ -1.34
LCP5YER127W YRF1-4O13559 1382 aa6.66□□□□□ -1.34
LCP5YER127W MGM1P32266 881 aa6.65□□□□□ -1.34
LCP5YER127W YKL100CP34248 587 aa6.65□□□□□ -1.34
LCP5YER127W YPT53P36019 220 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms