RNA–Protein interactions for RNA: YEL028W

YEL028W, Transcript of Dubious open reading frame, yeast

Gene YEL028W, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEL028W	YEL028W	HCS1	P34243	683 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	SNG1	P46950	547 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	YNL234W	P53857	426 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	RPA49	Q01080	415 aa	Predicted RBP	5.14	□□□□□ -1.59
YEL028W	YEL028W	TOF2	Q02208	771 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	ARX1	Q03862	593 aa	Known RBP	5.14	□□□□□ -1.59
YEL028W	YEL028W	ROY1	Q04847	553 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	ADE13	Q05911	482 aa	Known RBP	5.14	□□□□□ -1.59
YEL028W	YEL028W	YDL218W	Q07629	317 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	RAV1	P47104	1357 aa		5.14	□□□□□ -1.59
YEL028W	YEL028W	SRV2	P17555	526 aa	Known RBP	5.13	□□□□□ -1.59
YEL028W	YEL028W	CNA1	P23287	553 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	SEC66	P33754	206 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	YIL060W	P40519	144 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	NMD5	P46970	1048 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	SMM1	P53720	384 aa	Known RBP	5.13	□□□□□ -1.59
YEL028W	YEL028W	IDP3	P53982	420 aa	Known RBP	5.13	□□□□□ -1.59
YEL028W	YEL028W	RSC9	Q03124	581 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	YLR345W	Q06137	509 aa		5.13	□□□□□ -1.59
YEL028W	YEL028W	GAL4	P04386	881 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	CLC1	P17891	233 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	YAP1	P19880	650 aa	Known RBP	5.12	□□□□□ -1.59
YEL028W	YEL028W	OPI1	P21957	404 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	HXT3	P32466	567 aa	Known RBP	5.12	□□□□□ -1.59
YEL028W	YEL028W	YKL023W	P36103	277 aa	Known RBP	5.12	□□□□□ -1.59
YEL028W	YEL028W	YJL055W	P47044	245 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	YPT11	P48559	417 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	MSC1	Q03104	513 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	YMR160W	Q03823	816 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	ARP10	Q04549	284 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	THP1	Q08231	455 aa		5.12	□□□□□ -1.59
YEL028W	YEL028W	COR1	P07256	457 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	RPL31B	P0C2H9	113 aa	Known RBP	5.11	□□□□□ -1.59
YEL028W	YEL028W	BUD14	P27637	709 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	TUL1	P36096	758 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	FLO5	P38894	1075 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	JEM1	P40358	645 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	LCB2	P40970	561 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	ALK1	P43633	760 aa	Known RBP	5.11	□□□□□ -1.59
YEL028W	YEL028W	COP1	P53622	1201 aa	Known RBP	5.11	□□□□□ -1.59
YEL028W	YEL028W	KAP120	Q02932	1032 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	FMP45	Q07651	309 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
YEL028W	YEL028W	SPT7	P35177	1332 aa		5.11	□□□□□ -1.59
YEL028W	YEL028W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
YEL028W	YEL028W	MBR1	P23493	339 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	MNE1	P24720	663 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	AFG1	P32317	509 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	LRP1	P38801	184 aa	Known RBP	5.1	□□□□□ -1.59
YEL028W	YEL028W	VPS41	P38959	992 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	YIL024C	P40543	189 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	AIM22	P47051	409 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	CTL1	Q03220	320 aa	Known RBP	5.1	□□□□□ -1.59
YEL028W	YEL028W	RBS1	Q05672	457 aa	Known RBP	5.1	□□□□□ -1.59
YEL028W	YEL028W	SIL1	Q08199	421 aa		5.1	□□□□□ -1.59
YEL028W	YEL028W	APE1	P14904	514 aa		5.09	□□□□□ -1.59
YEL028W	YEL028W	SPB1	P25582	841 aa	Predicted RBP	5.09	□□□□□ -1.59
YEL028W	YEL028W	IDH2	P28241	369 aa	Known RBP	5.09	□□□□□ -1.59
YEL028W	YEL028W	MTR2	P34232	184 aa	Known RBP	5.09	□□□□□ -1.59
YEL028W	YEL028W	UBA4	P38820	440 aa		5.09	□□□□□ -1.59
YEL028W	YEL028W	PYK2	P52489	506 aa	Known RBP	5.09	□□□□□ -1.59
YEL028W	YEL028W	SHR3	Q02774	210 aa		5.09	□□□□□ -1.59
YEL028W	YEL028W	CRC1	Q12289	327 aa		5.09	□□□□□ -1.59
YEL028W	YEL028W	PAR32	Q12515	295 aa	Known RBP	5.09	□□□□□ -1.59
YEL028W	YEL028W	PGK1	P00560	416 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	SPS4	P09937	338 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	ERV1	P27882	189 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	URA7	P28274	579 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	RAD14	P28519	371 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	MCM4	P30665	933 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	YME2	P32843	850 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	SHP1	P34223	423 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	NTC20	P38302	140 aa	Predicted RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	APE4	P38821	490 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	NET1	P47035	1189 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	YGR149W	P48236	432 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	PKP2	P53170	491 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	EAF7	P53911	425 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	YPL014W	Q02606	381 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	RRP45	Q05636	305 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	POS5	Q06892	414 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	SSK1	Q07084	712 aa		5.08	□□□□□ -1.6
YEL028W	YEL028W	PDH1	Q12428	516 aa	Known RBP	5.08	□□□□□ -1.6
YEL028W	YEL028W	HSP82	P02829	709 aa	Known RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	CBP1	P07252	654 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	ELO2	P25358	347 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	VPH1	P32563	840 aa	Known RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	ARA1	P38115	344 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	BNA4	P38169	460 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	LAG1	P38703	411 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	MBB1	P39534	108 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	GDI1	P39958	451 aa	Known RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	XBP1	P40489	647 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	ULP2	P40537	1034 aa	Predicted RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	HXT9	P40885	567 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	CAK1	P43568	368 aa	Predicted RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	OCA1	P50946	238 aa	Predicted RBP	5.07	□□□□□ -1.6
YEL028W	YEL028W	YGL138C	P53122	345 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	SOL4	P53315	255 aa		5.07	□□□□□ -1.6
YEL028W	YEL028W	VTC3	Q02725	835 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms