RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W DIA3P52290 468 aa5.48□□□□□ -1.53
FOB1YDR110W DIP5P53388 608 aa5.48□□□□□ -1.53
FOB1YDR110W SQS1P53866 767 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W RPC11Q04307 110 aaPredicted RBP5.48□□□□□ -1.53
FOB1YDR110W VPS74Q06385 345 aa5.48□□□□□ -1.53
FOB1YDR110W GPN2Q08726 347 aaPredicted RBP5.48□□□□□ -1.53
FOB1YDR110W NDJ1Q12366 352 aa5.48□□□□□ -1.53
FOB1YDR110W YJR112W-AQ3E743 109 aa5.48□□□□□ -1.53
FOB1YDR110W YBR182C-AQ8TGU6 64 aa5.48□□□□□ -1.53
FOB1YDR110W YOS9Q99220 542 aa5.48□□□□□ -1.53
FOB1YDR110W TUB3P09734 445 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W TY2A-LR1P0C2J4 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-FP0CX61 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-GR2P0CX62 438 aa5.47□□□□□ -1.53
FOB1YDR110W ABF1P14164 731 aa5.47□□□□□ -1.53
FOB1YDR110W ERG8P24521 451 aa5.47□□□□□ -1.53
FOB1YDR110W PET18P25362 215 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-CP25383 438 aa5.47□□□□□ -1.53
FOB1YDR110W IMP3P32899 183 aaPredicted RBP5.47□□□□□ -1.53
FOB1YDR110W PMT1P33775 817 aa5.47□□□□□ -1.53
FOB1YDR110W GDT1P38301 280 aaPredicted RBP5.47□□□□□ -1.53
FOB1YDR110W YBR287WP38355 427 aa5.47□□□□□ -1.53
FOB1YDR110W TSL1P38427 1098 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W ERC1P38767 581 aa5.47□□□□□ -1.53
FOB1YDR110W RTT107P38850 1070 aa5.47□□□□□ -1.53
FOB1YDR110W HRB1P38922 454 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
FOB1YDR110W SHU2P38957 223 aa5.47□□□□□ -1.53
FOB1YDR110W MPT5P39016 859 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53 RIP-Chip
FOB1YDR110W THO1P40040 218 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W KAP114P53067 1004 aa5.47□□□□□ -1.53
FOB1YDR110W MPS2P53159 387 aa5.47□□□□□ -1.53
FOB1YDR110W DRN1P53255 507 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W SLI1P53304 468 aa5.47□□□□□ -1.53
FOB1YDR110W NOG2P53742 486 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W INN1P53901 409 aa5.47□□□□□ -1.53
FOB1YDR110W FMP30Q02883 468 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-DR2Q03483 438 aa5.47□□□□□ -1.53
FOB1YDR110W ENT5Q03769 411 aaKnown RBP5.47□□□□□ -1.53
FOB1YDR110W BNA7Q04066 261 aa5.47□□□□□ -1.53
FOB1YDR110W YLR407WQ06070 228 aa5.47□□□□□ -1.53
FOB1YDR110W DCS1Q06151 350 aa5.47□□□□□ -1.53
FOB1YDR110W REX4Q08237 289 aa5.47□□□□□ -1.53
FOB1YDR110W BSC6Q08280 497 aa5.47□□□□□ -1.53
FOB1YDR110W BUD7Q08754 746 aa5.47□□□□□ -1.53
FOB1YDR110W ICL2Q12031 575 aa5.47□□□□□ -1.53
FOB1YDR110W AEP3Q12089 606 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-BQ12260 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-OR2Q12293 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-DR1Q12392 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-OR1Q12439 438 aa5.47□□□□□ -1.53
FOB1YDR110W TY2A-DR3Q99303 438 aa5.47□□□□□ -1.53
FOB1YDR110W VMR1P38735 1592 aa5.46□□□□□ -1.53
FOB1YDR110W RAD7P06779 565 aa5.46□□□□□ -1.54
FOB1YDR110W DFR1P07807 211 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
FOB1YDR110W GIT1P25346 518 aa5.46□□□□□ -1.54
FOB1YDR110W BCK2P33306 851 aa5.46□□□□□ -1.54
FOB1YDR110W MAE1P36013 669 aaKnown RBP5.46□□□□□ -1.54
FOB1YDR110W FMC1P40491 155 aa5.46□□□□□ -1.54
FOB1YDR110W ICE2P40499 491 aa5.46□□□□□ -1.54
FOB1YDR110W MID1P41821 548 aa5.46□□□□□ -1.54
FOB1YDR110W SLS1P42900 643 aa5.46□□□□□ -1.54
FOB1YDR110W AAD10P47182 288 aa5.46□□□□□ -1.54
FOB1YDR110W YGR127WP53275 312 aa5.46□□□□□ -1.54
FOB1YDR110W CUS2P53830 285 aaPredicted RBP5.46□□□□□ -1.54
FOB1YDR110W RNT1Q02555 471 aa5.46□□□□□ -1.54
FOB1YDR110W RSM24Q03976 319 aa5.46□□□□□ -1.54
FOB1YDR110W SPC24Q04477 213 aa5.46□□□□□ -1.54
FOB1YDR110W RQC1Q05468 723 aaKnown RBP5.46□□□□□ -1.54
FOB1YDR110W HRQ1Q05549 1077 aa5.46□□□□□ -1.54
FOB1YDR110W YEH1Q07804 573 aa5.46□□□□□ -1.54
FOB1YDR110W YEH2Q07950 538 aa5.46□□□□□ -1.54
FOB1YDR110W SIL1Q08199 421 aa5.46□□□□□ -1.54
FOB1YDR110W DNL4Q08387 944 aaPredicted RBP5.46□□□□□ -1.54
FOB1YDR110W INP53Q12271 1107 aa5.46□□□□□ -1.54
FOB1YDR110W YLR149CQ99296 730 aa5.46□□□□□ -1.54
FOB1YDR110W USO1P25386 1790 aa5.46□□□□□ -1.54
FOB1YDR110W HAP1P0CE41 1502 aa5.46□□□□□ -1.54
FOB1YDR110W YLR278CQ05854 1341 aa5.46□□□□□ -1.54
FOB1YDR110W ARG4P04076 463 aaPredicted RBP5.45□□□□□ -1.54
FOB1YDR110W RPL11AP0C0W9 174 aaKnown RBP5.45□□□□□ -1.54
FOB1YDR110W RPS24AP0CX31 135 aaKnown RBP5.45□□□□□ -1.54
FOB1YDR110W RPS24BP0CX32 135 aaKnown RBP5.45□□□□□ -1.54
FOB1YDR110W YCP4P25349 247 aaKnown RBP5.45□□□□□ -1.54
FOB1YDR110W ADE1P27616 306 aa5.45□□□□□ -1.54
FOB1YDR110W YPT7P32939 208 aa5.45□□□□□ -1.54
FOB1YDR110W CCT6P39079 546 aa5.45□□□□□ -1.54
FOB1YDR110W IST3P40565 148 aaPredicted RBP5.45□□□□□ -1.54
FOB1YDR110W OYE3P41816 400 aaPredicted RBP5.45□□□□□ -1.54
FOB1YDR110W YFL066CP43538 392 aa5.45□□□□□ -1.54
FOB1YDR110W SAD1P43589 448 aa5.45□□□□□ -1.54
FOB1YDR110W STB2P46679 850 aa5.45□□□□□ -1.54
FOB1YDR110W IBA57P47158 497 aa5.45□□□□□ -1.54
FOB1YDR110W FMS1P50264 508 aa5.45□□□□□ -1.54
FOB1YDR110W YGL117WP53133 265 aa5.45□□□□□ -1.54
FOB1YDR110W CSL4P53859 292 aaPredicted RBP5.45□□□□□ -1.54
FOB1YDR110W YDR179W-AQ03983 463 aa5.45□□□□□ -1.54
FOB1YDR110W MUS81Q04149 632 aaPredicted RBP5.45□□□□□ -1.54
FOB1YDR110W DCR2Q05924 578 aa5.45□□□□□ -1.54
FOB1YDR110W GPN3Q06543 272 aa5.45□□□□□ -1.54
FOB1YDR110W RDR1Q08904 546 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms