RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	NUT1	P53114	1132 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	FOL1	P53848	824 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YPL068C	Q02749	293 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	SYC1	Q08553	188 aa	Predicted RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	TY1A-GR1	Q12085	440 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	REC8	Q12188	680 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	DCP1	Q12517	231 aa	Predicted RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	TY1A-OL	Q92392	440 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	RAD7	P06779	565 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	CAR2	P07991	424 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	MATALPHA1	P0CY06	175 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	HMLALPHA1	P0CY07	175 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	PHO8	P11491	566 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	DBP2	P24783	546 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	VMA5	P31412	392 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	CYS4	P32582	507 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	SPO23	P33757	523 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	JEN1	P36035	616 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	SEA4	P38164	1038 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YBL086C	P38177	466 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	ATG7	P38862	630 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	NVJ1	P38881	321 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	UTP25	P40498	721 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	IRC24	P40580	263 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	GNA1	P43577	159 aa	Predicted RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	SPT20	P50875	604 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	PYK2	P52489	506 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	SLD3	P53135	668 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YBP2	P53169	641 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YGR021W	P53212	290 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	PEX8	P53248	589 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	PBP1	P53297	722 aa	Known RBP	4.57	□□□□□ -1.68
VHC1	YBR235W	MFB1	Q04922	465 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YPR091C	Q06833	770 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	TY3A-G	Q12173	290 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YOR214C	Q12282	236 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	YGL194C-A	Q2V2P6	80 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	TY3A-I	Q99219	290 aa		4.57	□□□□□ -1.68
VHC1	YBR235W	DNF3	Q12674	1656 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	MRP1	P10662	321 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	SEC18	P18759	758 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	EXO70	P19658	623 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	PTC6	P25646	442 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	YIM1	P28625	365 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	ARO7	P32178	256 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	DAL3	P32459	195 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	HYM1	P32464	399 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	GOS1	P38736	223 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	SEN34	P39707	275 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	LCP5	P40079	357 aa	Predicted RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	TOK1	P40310	691 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	YKE4	P40544	346 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	MAD2	P40958	196 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	HXT14	P42833	540 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	IRC18	P47056	224 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	NBP1	P52919	319 aa	Predicted RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	JAC1	P53193	184 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	YTP1	P53584	459 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	YMR265C	Q03508	461 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	RCO1	Q04779	684 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	ZEO1	Q08245	113 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
VHC1	YBR235W	YLR053C	Q12026	108 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	PTC5	Q12511	572 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	PMA1	P05030	918 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	TPK1	P06244	397 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	TOP3	P13099	656 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	APA1	P16550	321 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	SPO16	P17122	198 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	ADP1	P25371	1049 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	NTG1	P31378	399 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	MGM101	P32787	269 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	SUI1	P32911	108 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	MSN4	P33749	630 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	APN2	P38207	520 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	VMR1	P38735	1592 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	BIM1	P40013	344 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	SLM1	P40485	686 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	HXT10	P43581	546 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	NOG2	P53742	486 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	KTR5	P53966	522 aa	Predicted RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	STP1	Q00947	519 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	CAB1	Q04430	367 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	TDA9	Q04545	1251 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	EMG1	Q06287	252 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	PSY3	Q12318	242 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	PNS1	Q12412	539 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	RRD2	Q12461	358 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	ISN1	Q99312	450 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	MRP7	P12687	371 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	TRX2	P22803	104 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	RPL24B	P24000	155 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	FUN30	P31380	1131 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	NGG1	P32494	702 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	BEM3	P32873	1128 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	TSA1	P34760	196 aa	Known RBP	4.56	□□□□□ -1.68
VHC1	YBR235W	ERG7	P38604	731 aa		4.56	□□□□□ -1.68
VHC1	YBR235W	EFM1	P38732	585 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms