RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
LINC00339-213ENST00000642137 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
LINC00339-213ENST00000642137 PPP1R18Q6NYC8 613 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 TEX2Q8IWB9 1127 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 SAMD3Q8N6K7 520 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 CHST13Q8NET6 341 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 AIFM3Q96NN9 605 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 ESYT2A0FGR8 921 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 SMCO2A6NFE2 343 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 TRPA1O75762 1119 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 ALAS1P13196 640 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 NAPAP54920 295 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 TRIM29Q14134 588 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 USH1GQ495M9 461 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.14
LINC00339-213ENST00000642137 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 TRERF1Q96PN7 1200 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 MOV10L1Q9BXT6 1211 aaKnown RBP14.18□□□□□ -0.14
LINC00339-213ENST00000642137 ZMYND12Q9H0C1 365 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 GLT8D2Q9H1C3 349 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 MROH8Q9H579 483 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 SAGE1Q9NXZ1 904 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 MAP3K20Q9NYL2 800 aaKnown RBP14.18□□□□□ -0.14
LINC00339-213ENST00000642137 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 CPA4Q9UI42 421 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
LINC00339-213ENST00000642137 PEX10O60683 326 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 GNA11P29992 359 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 MRPL12P52815 198 aaKnown RBP14.17□□□□□ -0.14
LINC00339-213ENST00000642137 NLRP5P59047 1200 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 KRT40Q6A162 431 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-213ENST00000642137 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 PHF20Q9BVI0 1012 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
LINC00339-213ENST00000642137 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 ERCC3P19447 782 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 CALML3P27482 149 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 NCAPG2Q86XI2 1143 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 CLEC4DQ8WXI8 215 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 R3HDMLQ9H3Y0 253 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 ACAD9Q9H845 621 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 PSTPIP2Q9H939 334 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 RIC8AQ9NPQ8 531 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 RNF146Q9NTX7 359 aa14.16□□□□□ -0.14
LINC00339-213ENST00000642137 STRNO43815 780 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 MMP1P03956 469 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 SYT1P21579 422 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 MAPK4P31152 587 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 GHRHRQ02643 423 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
LINC00339-213ENST00000642137 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 CUL5Q93034 780 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 GJB4Q9NTQ9 266 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 KCNJ14Q9UNX9 436 aa14.15□□□□□ -0.14
LINC00339-213ENST00000642137 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
LINC00339-213ENST00000642137 H3BQV1 296 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 GCOM1H8Y6P7 765 aaPredicted RBP14.14□□□□□ -0.15
LINC00339-213ENST00000642137 PIK3CDO00329 1044 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 MEIS2O14770 477 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 OPLAHO14841 1288 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 STX6O43752 255 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 POLR2MP0CAP2 368 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 TAL1P17542 331 aaPredicted RBP14.14□□□□□ -0.15
LINC00339-213ENST00000642137 ADCY7P51828 1080 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00339-213ENST00000642137 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
LINC00339-213ENST00000642137 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 PORCNQ9H237 461 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 EFCC1Q9HA90 598 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
LINC00339-213ENST00000642137 NFIBO00712 420 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 CFBP00751 764 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 DDIT3P35638 169 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 KRT2P35908 639 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
LINC00339-213ENST00000642137 HSD17B4P51659 736 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 FOSBP53539 338 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 SP3Q02447 781 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 NPY5RQ15761 445 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms