RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 APPBP2Q92624 585 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 A1CFQ9NQ94 594 aaKnown RBP11.9□□□□□ -0.5
PHGDH-222ENST00000641587 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 FEM1BQ9UK73 627 aa11.9□□□□□ -0.5
PHGDH-222ENST00000641587 TCF20Q9UGU0 1960 aaKnown RBP11.9□□□□□ -0.5
PHGDH-222ENST00000641587 ZNF536O15090 1300 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 TMEM232C9JQI7 657 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 MYOGP15173 224 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 RABGGTBP53611 331 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 PSMC6P62333 389 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-222ENST00000641587 KBTBD3Q8NAB2 608 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-222ENST00000641587 HERVK_113Q902F9 699 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 ASB2Q96Q27 587 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
PHGDH-222ENST00000641587 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
PHGDH-222ENST00000641587 TRPV6Q9H1D0 765 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 WNT8AQ9H1J5 351 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
PHGDH-222ENST00000641587 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
PHGDH-222ENST00000641587 SCN5AQ14524 2016 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 B4GALT4O60513 344 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 TTLL1O95922 423 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 APPP05067 770 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 BMP3P12645 472 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 SMPD1P17405 629 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 OAZ1P54368 228 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 CCDC174Q6PII3 467 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-222ENST00000641587 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 GMCL1P1Q8NEA9 526 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
PHGDH-222ENST00000641587 MKL1Q969V6 931 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 SCLYQ96I15 445 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 NECAB3Q96P71 396 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-222ENST00000641587 ECHDC1Q9NTX5 307 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 PLIN4Q96Q06 1357 aa11.88□□□□□ -0.51
PHGDH-222ENST00000641587 RNF113AO15541 343 aaKnown RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 FGBP02675 491 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 ALAS1P13196 640 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 MX1P20591 662 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 STAT2P52630 851 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 NKX3-2P78367 333 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 IKQ13123 557 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 RAB30Q15771 203 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 FSCN1Q16658 493 aaKnown RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
PHGDH-222ENST00000641587 UHRF1Q96T88 793 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 NOC4LQ9BVI4 516 aaKnown RBP11.87□□□□□ -0.51
PHGDH-222ENST00000641587 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 MCCP23508 829 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 TFAP4Q01664 338 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 TAPT1Q6NXT6 567 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 MTMR7Q9Y216 660 aa11.86□□□□□ -0.51
PHGDH-222ENST00000641587 PRRC2BQ5JSZ5 2229 aaKnown RBP11.85□□□□□ -0.51
PHGDH-222ENST00000641587 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 RFXAPO00287 272 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 NMT2O60551 498 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 CYP2C9P11712 490 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 SLC1A4P43007 532 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 PDE1AP54750 535 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 MRPS5P82675 430 aaKnown RBP11.85□□□□□ -0.51
PHGDH-222ENST00000641587 TFF2Q03403 129 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 NCOR1O75376 2440 aa11.85□□□□□ -0.51
PHGDH-222ENST00000641587 ASB14A6NK59 587 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms