RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 AFAP1L1Q8TED9 768 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 ZSCAN31Q96LW9 406 aaPredicted RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TSC22D3Q99576 134 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 BRD8Q9H0E9 1235 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 NRBP1Q9UHY1 535 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 ZNF652Q9Y2D9 606 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 GMEB1Q9Y692 573 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TMEM221A6NGB7 291 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 HMGB1P1B2RPK0 211 aaPredicted RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 TM4SF1P30408 202 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 CCT5P48643 541 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 SCNN1BP51168 640 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 C1QTNF8P60827 252 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 UBE2HP62256 183 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 DYNLL1P63167 89 aaKnown RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 DHX8Q14562 1220 aaKnown RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 NFIXQ14938 502 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 CEP57Q86XR8 500 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 ZNF384Q8TF68 577 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 LZICQ8WZA0 190 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TAF4BQ92750 862 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 FTOQ9C0B1 505 aaKnown RBP eCLIP8.87□□□□□ -0.99
RTTN-223ENST00000640931 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
RTTN-223ENST00000640931 SWAP70Q9UH65 585 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 TRPC6Q9Y210 931 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
RTTN-223ENST00000640931 NEDD4P46934 1319 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 ATRNO75882 1429 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 CYP2D7A0A087X1C5 515 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
RTTN-223ENST00000640931 ZFXP17010 805 aaPredicted RBP8.86□□□□□ -0.99
RTTN-223ENST00000640931 PSMD7P51665 324 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 DRP2Q13474 957 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
RTTN-223ENST00000640931 OLFML1Q6UWY5 402 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 SAPCD2Q86UD0 394 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 PROM2Q8N271 834 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 FAM84BQ96KN1 310 aaPredicted RBP8.86□□□□□ -0.99
RTTN-223ENST00000640931 CLIC6Q96NY7 704 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 SPAG5Q96R06 1193 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 STRBPQ96SI9 672 aaKnown RBP8.86□□□□□ -0.99
RTTN-223ENST00000640931 TRIM5Q9C035 493 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 PLEKHA4Q9H4M7 779 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
RTTN-223ENST00000640931 ZSCAN12O43309 604 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 PRC1O43663 620 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 MMEP08473 750 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 UQCRFS1P1P0C7P4 283 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 KCNA2P16389 499 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 RFC4P35249 363 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 USP5P45974 858 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CUL4BQ13620 913 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 KRT32Q14532 448 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CCDC40Q4G0X9 1142 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 RC3H1Q5TC82 1133 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 NUGGCQ68CJ6 796 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CCDC73Q6ZRK6 1079 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 BZW1Q7L1Q6 419 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 RSRC2Q7L4I2 434 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 CATIPQ7Z7H3 387 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 MB21D2Q8IYB1 491 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 SDR42E1Q8WUS8 393 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CORO1BQ9BR76 489 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 MYL10Q9BUA6 226 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 YIPF3Q9GZM5 350 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 ALDH8A1Q9H2A2 487 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 VCPKMTQ9H867 229 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 ZWILCHQ9H900 591 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 TNRC6CQ9HCJ0 1690 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 CASZ1Q86V15 1759 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 PTPDC1A2A3K4 754 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 B4DLN1 442 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 B4E1Z4 1266 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 ZNF213O14771 459 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 MARCH6O60337 910 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 GNAT1P11488 350 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 INHBCP55103 352 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 HDAC4P56524 1084 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 TUBB4BP68371 445 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CCZ1BP86790 482 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 CEBPZQ03701 1054 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 ACTN3Q08043 901 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 ENOX2Q16206 610 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 GRIK5Q16478 980 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms