RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 FDX1P10109 184 aa17.57■□□□□ 0.4
KCNC1-213ENST00000640909 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
KCNC1-213ENST00000640909 IQSEC1Q6DN90 963 aa17.57■□□□□ 0.4
KCNC1-213ENST00000640909 CPXCR1Q8N123 301 aa17.57■□□□□ 0.4
KCNC1-213ENST00000640909 LCORLQ8N3X6 602 aa17.57■□□□□ 0.4
KCNC1-213ENST00000640909 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.57■□□□□ 0.4
KCNC1-213ENST00000640909 CCDC8Q9H0W5 538 aaPredicted RBP17.57■□□□□ 0.4
KCNC1-213ENST00000640909 ZNF532Q9HCE3 1301 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 DYNC1LI2O43237 492 aaPredicted RBP17.56■□□□□ 0.4
KCNC1-213ENST00000640909 IL9P15248 144 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 PSMC6P62333 389 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 PTCRAQ6ISU1 281 aaPredicted RBP17.56■□□□□ 0.4
KCNC1-213ENST00000640909 TRMT13Q9NUP7 481 aaKnown RBP17.56■□□□□ 0.4
KCNC1-213ENST00000640909 POLR3EQ9NVU0 708 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 PRKAG3Q9UGI9 489 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 FAM50BQ9Y247 325 aa17.56■□□□□ 0.4
KCNC1-213ENST00000640909 BRWD1Q9NSI6 2320 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 ZNF318Q5VUA4 2279 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 TCRBV5S4A2TA0A5A2 114 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 USP17L21D6R901 530 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
KCNC1-213ENST00000640909 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 CYP2C9P11712 490 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 SMPD1P17405 629 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 KCNA5P22460 613 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 KCNJ6P48051 423 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
KCNC1-213ENST00000640909 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
KCNC1-213ENST00000640909 GDPD5Q8WTR4 605 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 MFSD14AQ96MC6 490 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
KCNC1-213ENST00000640909 SCN10AQ9Y5Y9 1956 aa17.54■□□□□ 0.4
KCNC1-213ENST00000640909 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
KCNC1-213ENST00000640909 RETREG2Q8NC44 543 aa17.54■□□□□ 0.4
KCNC1-213ENST00000640909 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
KCNC1-213ENST00000640909 RAVER2Q9HCJ3 691 aaKnown RBP17.54■□□□□ 0.4
KCNC1-213ENST00000640909 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
KCNC1-213ENST00000640909 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 F5H6K3 240 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 NDUFB10O96000 172 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 TRIM27P14373 513 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 SLC4A3P48751 1232 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 CPT1AP50416 773 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 ERVK-21P61565 698 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 KLRC3Q07444 240 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 BFSP2Q13515 415 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 NEK9Q8TD19 979 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 TGS1Q96RS0 853 aaKnown RBP17.53■□□□□ 0.4
KCNC1-213ENST00000640909 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
KCNC1-213ENST00000640909 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
KCNC1-213ENST00000640909 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 CNTN2Q02246 1040 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 PTPN11Q06124 597 aaPredicted RBP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 PRRX2Q99811 253 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 A1CFQ9NQ94 594 aaKnown RBP17.52■□□□□ 0.4
KCNC1-213ENST00000640909 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
KCNC1-213ENST00000640909 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
KCNC1-213ENST00000640909 WDR5P61964 334 aaKnown RBP17.51■□□□□ 0.39
KCNC1-213ENST00000640909 TKFCQ3LXA3 575 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 TAPT1Q6NXT6 567 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 SPRED2Q7Z698 418 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
KCNC1-213ENST00000640909 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
KCNC1-213ENST00000640909 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
KCNC1-213ENST00000640909 SOWAHBA6NEL2 793 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 C19orf67A6NJJ6 358 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 PTPN5P54829 565 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 ZP2Q05996 745 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 CCDC155Q8N6L0 562 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 MORC4Q8TE76 937 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 RAD9AQ99638 391 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 ZBED2Q9BTP6 218 aa17.5■□□□□ 0.39
KCNC1-213ENST00000640909 ARPP21Q9UBL0 812 aaPredicted RBP17.5■□□□□ 0.39
KCNC1-213ENST00000640909 LOC102724159A0A0B4J2E5 919 aa17.49■□□□□ 0.39
KCNC1-213ENST00000640909 EFCAB14O75071 495 aa17.49■□□□□ 0.39
KCNC1-213ENST00000640909 MBD4O95243 580 aa17.49■□□□□ 0.39
KCNC1-213ENST00000640909 GJB5O95377 273 aa17.49■□□□□ 0.39
KCNC1-213ENST00000640909 PWP2Q15269 919 aaKnown RBP17.49■□□□□ 0.39
KCNC1-213ENST00000640909 PKN1Q16512 942 aa17.49■□□□□ 0.39
KCNC1-213ENST00000640909 BRDTQ58F21 947 aaPredicted RBP17.49■□□□□ 0.39
KCNC1-213ENST00000640909 AACSQ86V21 672 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms