RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 TRAF1Q13077 416 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 TKFCQ3LXA3 575 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 GALNT17Q6IS24 598 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 PHF20Q9BVI0 1012 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 SPATC1LQ9H0A9 340 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-225ENST00000640900 KIF3AQ9Y496 699 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 RIPK3Q9Y572 518 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 PDCP20941 246 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 STAT3P40763 770 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 ERVK-24P63145 666 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 AKAP17AQ02040 695 aaKnown RBP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 IKQ13123 557 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 FAM110CQ1W6H9 321 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 Q3C1V9 767 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 OTUD7BQ6GQQ9 843 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 TNFRSF25Q93038 417 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 GJB4Q9NTQ9 266 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 SEC63Q9UGP8 760 aaKnown RBP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 CIZ1Q9ULV3 898 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-225ENST00000640900 MTMR6Q9Y217 621 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 PCDHA1Q9Y5I3 950 aa10.51□□□□□ -0.73
SCARB2-225ENST00000640900 MEIS2O14770 477 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 BRD1O95696 1058 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 MMP1P03956 469 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 COPB2P35606 906 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 HSD17B4P51659 736 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 CRHR2Q13324 411 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 KRT40Q6A162 431 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 COA7Q96BR5 231 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 MOV10L1Q9BXT6 1211 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 R3HDMLQ9H3Y0 253 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 RIC8AQ9NPQ8 531 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 MAP3K20Q9NYL2 800 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 ZDHHC9Q9Y397 364 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 MRPL11Q9Y3B7 192 aaKnown RBP10.5□□□□□ -0.73
SCARB2-225ENST00000640900 ABCB11O95342 1321 aa10.5□□□□□ -0.73
SCARB2-225ENST00000640900 STX6O43752 255 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 PEX10O60683 326 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 SLC25A27O95847 323 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CALML3P27482 149 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CCDC174Q6PII3 467 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 FAM184AQ8NB25 1140 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CHST13Q8NET6 341 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 GPRC5AQ8NFJ5 357 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 PIBF1Q8WXW3 757 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 GLT8D2Q9H1C3 349 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-225ENST00000640900 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 SAGE1Q9NXZ1 904 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
SCARB2-225ENST00000640900 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 NFIBO00712 420 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 EDIL3O43854 480 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 HSP90AA1P07900 732 aaKnown RBP10.48□□□□□ -0.73
SCARB2-225ENST00000640900 PKP1Q13835 747 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 ABRAQ8N0Z2 381 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 SMCR8Q8TEV9 937 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-225ENST00000640900 CRYGNQ8WXF5 182 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 TBC1D5Q92609 795 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 PORCNQ9H237 461 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 FOXP1Q9H334 677 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-225ENST00000640900 MROH8Q9H579 483 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 PSTPIP2Q9H939 334 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 ISY1Q9ULR0 285 aaKnown RBP10.48□□□□□ -0.73
SCARB2-225ENST00000640900 KCNJ14Q9UNX9 436 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 FRMPD4Q14CM0 1322 aa10.48□□□□□ -0.73
SCARB2-225ENST00000640900 SMCO2A6NFE2 343 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 IGHA2P01877 340 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 XBP1P17861 261 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms