RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 EIF3HO15372 352 aaKnown RBP eCLIP15.28■□□□□ 0.04
PAX6-280ENST00000640872 MYL1P05976 194 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 PCP11498 1178 aaKnown RBP15.28■□□□□ 0.04
PAX6-280ENST00000640872 KIF5AQ12840 1032 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 CCDC70Q6NSX1 233 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 SND1Q7KZF4 910 aaKnown RBP eCLIP15.28■□□□□ 0.04
PAX6-280ENST00000640872 CERS3Q8IU89 383 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 RRP36Q96EU6 259 aaKnown RBP15.28■□□□□ 0.04
PAX6-280ENST00000640872 BRIP1Q9BX63 1249 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 CAPS2Q9BXY5 557 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
PAX6-280ENST00000640872 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 GOLGA8KD6RF30 607 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 DDB1Q16531 1140 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 FIGNQ5HY92 759 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
PAX6-280ENST00000640872 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
PAX6-280ENST00000640872 LRRC1Q9BTT6 524 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 EHD4Q9H223 541 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 KBTBD4Q9NVX7 518 aa15.27■□□□□ 0.04
PAX6-280ENST00000640872 DMGDHQ9UI17 866 aaKnown RBP15.27■□□□□ 0.04
PAX6-280ENST00000640872 KCNQ2O43526 872 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 PRLRP16471 622 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 SKIDA1Q1XH10 827 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 MMS22LQ6ZRQ5 1243 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 MICALL1Q8N3F8 863 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 CSGALNACT2Q8N6G5 542 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 TRIM58Q8NG06 486 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.03
PAX6-280ENST00000640872 CAPN6Q9Y6Q1 641 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 FAM169AQ9Y6X4 670 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 EP400Q96L91 3159 aa15.27■□□□□ 0.03
PAX6-280ENST00000640872 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 COL1A1P02452 1464 aaPredicted RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 EBAG9O00559 213 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 EPB41P11171 864 aaKnown RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 MIIPQ5JXC2 388 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 SMCR8Q8TEV9 937 aaPredicted RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 LRRC15Q8TF66 581 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 ITPK1Q13572 414 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 ZSCAN29Q8IWY8 852 aaPredicted RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 CNOT6LQ96LI5 555 aaKnown RBP15.26■□□□□ 0.03
PAX6-280ENST00000640872 ERGIC2Q96RQ1 377 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 HINFPQ9BQA5 517 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 ABCF2Q9UG63 623 aa15.26■□□□□ 0.03
PAX6-280ENST00000640872 ZNF804BA4D1E1 1349 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 NMT2O60551 498 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 CCNE1P24864 410 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 CALML3P27482 149 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 HNRNPH3P31942 346 aaKnown RBP15.25■□□□□ 0.03
PAX6-280ENST00000640872 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 KCNQ4P56696 695 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 GNGT1P63211 74 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 SKOR1P84550 965 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 BCAS4Q8TDM0 211 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 KAT2BQ92831 832 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 P2RX5Q93086 422 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 CCSER1Q9C0I3 900 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 ORC4O43929 436 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 TACC1O75410 805 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 ERLIN2O94905 339 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 PLEKP08567 350 aaPredicted RBP15.25■□□□□ 0.03
PAX6-280ENST00000640872 IL6STP40189 918 aaPredicted RBP15.25■□□□□ 0.03
PAX6-280ENST00000640872 SF3B2Q13435 895 aaKnown RBP15.25■□□□□ 0.03
PAX6-280ENST00000640872 SPA17Q15506 151 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 SUSD4Q5VX71 490 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 EMBQ6PCB8 327 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 DTHD1Q6ZMT9 781 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 TSEN2Q8NCE0 465 aaKnown RBP15.25■□□□□ 0.03
PAX6-280ENST00000640872 CCDC42Q96M95 316 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
PAX6-280ENST00000640872 M0R2N6 131 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 OPA1O60313 960 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 TNFRSF8P28908 595 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
PAX6-280ENST00000640872 EPHB4P54760 987 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 CCDC96Q2M329 555 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 TTMPQ5BVD1 217 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 HAUS3Q68CZ6 603 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 ANKRD18AQ8IVF6 992 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 DOT1LQ8TEK3 1739 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 OSBPL9Q96SU4 736 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms