RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, human

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRICKLE1-215	ENST00000640055	ZNF526	Q8TF50	670 aa	Predicted RBP	13.73	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	DDX25	Q9UHL0	483 aa	Known RBP	13.73	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	CACNA1F	O60840	1977 aa		13.73	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	LMO7	Q8WWI1	1683 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	PSMD14	O00487	310 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	CLIC2	O15247	247 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	HARS	P12081	509 aa	Known RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	ATL3	Q6DD88	541 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	DGKH	Q86XP1	1220 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	NIM1K	Q8IY84	436 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	TTLL6	Q8N841	843 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	TRERF1	Q96PN7	1200 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	RGL1	Q9NZL6	768 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEB3	A0JP26	581 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	ERICH4	A6NGS2	130 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEC	B2RU33	542 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	PHACTR2	O75167	634 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	SLFN14	P0C7P3	912 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	MRPL12	P52815	198 aa	Known RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	CDC37	Q16543	378 aa	Predicted RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEB	Q6S5H4	581 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	UBXN4	Q92575	508 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	PURB	Q96QR8	312 aa	Known RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	PCDHB13	Q9Y5F0	798 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	MARF1	Q9Y4F3	1742 aa	Known RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	KDM3B	Q7LBC6	1761 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEF	A5A3E0	1075 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	ZBTB39	O15060	712 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEI	P0CG38	1075 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	CTTN	Q14247	550 aa	Known RBP	13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEG	Q6S5H5	508 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	POTEE	Q6S8J3	1075 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	TOGARAM2	Q6ZUX3	1019 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	SPATA31A6	Q5VVP1	1343 aa		13.72	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	RHBDL3	P58872	404 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	APBA1	Q02410	837 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	KMT5B	Q4FZB7	885 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	SP8	Q8IXZ3	490 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	CUL5	Q93034	780 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	NOC4L	Q9BVI4	516 aa	Known RBP	13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	ZMYND10	O75800	440 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	BAG6	P46379	1132 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	MORC3	Q14149	939 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	SV2B	Q7L1I2	683 aa		13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	MYH14	Q7Z406	1995 aa	Known RBP	13.71	□□□□□ -0.21
PRICKLE1-215	ENST00000640055	ZNF500	O60304	480 aa	Predicted RBP	13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	STK4	Q13043	487 aa		13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	SLC35G1	Q2M3R5	365 aa		13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	IKZF4	Q9H2S9	585 aa		13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	BCAS3	Q9H6U6	928 aa		13.71	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	VIRMA	Q69YN4	1812 aa	Known RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	GPR75-ASB3	A0A0A6YYF3	556 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	TESPA1	A2RU30	521 aa	Predicted RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	DPYD	Q12882	1025 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	IL17A	Q16552	155 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ZNF772	Q68DY9	489 aa	Predicted RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	PLA2G4D	Q86XP0	818 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	HDAC9	Q9UKV0	1011 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	PAXBP1	Q9Y5B6	917 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ASTN2	O75129	1339 aa	Predicted RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	KCNJ18	B7U540	433 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	RAPGEF1	Q13905	1077 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	KCNJ12	Q14500	433 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	KANK3	Q6NY19	840 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ZNF341	Q9BYN7	854 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	TRIM10	Q9UDY6	481 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	RFX7	Q2KHR2	1363 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	AKR1B10	O60218	316 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	FLOT1	O75955	427 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	EGFR	P00533	1210 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	EIF2AK2	P19525	551 aa	Known RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	PMS1	P54277	932 aa	Known RBP	13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	SLC15A2	Q16348	729 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	MLKL	Q8NB16	471 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	NEDD1	Q8NHV4	660 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	JADE2	Q9NQC1	790 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	SPTLC3	Q9NUV7	552 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	PI4KB	Q9UBF8	816 aa		13.7	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	SCN11A	Q9UI33	1791 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	CASQ1	P31415	396 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	SPECC1L	Q69YQ0	1117 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	LRRN4CL	Q8ND94	238 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	BARHL2	Q9NY43	387 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ALS2	Q96Q42	1657 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	GSDMD	P57764	484 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	CNKSR1	Q969H4	720 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	FERMT2	Q96AC1	680 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	PAGR1	Q9BTK6	254 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	GINS2	Q9Y248	185 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	STXBP3	O00186	592 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	ORC4	O43929	436 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	EVC	P57679	992 aa		13.69	□□□□□ -0.22
PRICKLE1-215	ENST00000640055	UTP14C	Q5TAP6	766 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms