RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SUCOQ9UBS9 1254 aaKnown RBP8.71□□□□□ -1.02
RFC1-217ENST00000639695 MCM8Q9UJA3 840 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 IRS4O14654 1257 aaPredicted RBP8.7□□□□□ -1.02
RFC1-217ENST00000639695 L1CAMP32004 1257 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 STAT3P40763 770 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 FNDC3BQ53EP0 1204 aaKnown RBP8.7□□□□□ -1.02
RFC1-217ENST00000639695 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
RFC1-217ENST00000639695 THAP5Q7Z6K1 395 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 MFSD2AQ8NA29 543 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
RFC1-217ENST00000639695 PPP1R14AQ96A00 147 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 SLC6A18Q96N87 628 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 DCP1AQ9NPI6 582 aaPredicted RBP8.7□□□□□ -1.02
RFC1-217ENST00000639695 TJP2Q9UDY2 1190 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 NCANO14594 1321 aa8.7□□□□□ -1.02
RFC1-217ENST00000639695 CST3P01034 146 aaPredicted RBP8.69□□□□□ -1.02
RFC1-217ENST00000639695 TP53P04637 393 aaPredicted RBP8.69□□□□□ -1.02
RFC1-217ENST00000639695 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
RFC1-217ENST00000639695 NFKB2Q00653 900 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 ODR4Q5SWX8 454 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 CDH24Q86UP0 819 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 THNSL2Q86YJ6 484 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 MRPL41Q8IXM3 137 aaKnown RBP8.69□□□□□ -1.02
RFC1-217ENST00000639695 ABHD4Q8TB40 342 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 JDP2Q8WYK2 163 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 CCDC136Q96JN2 1154 aa8.69□□□□□ -1.02
RFC1-217ENST00000639695 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.69□□□□□ -1.02
RFC1-217ENST00000639695 NCOA5Q9HCD5 579 aaKnown RBP8.69□□□□□ -1.02
RFC1-217ENST00000639695 TRBV23-1A0A0A0MS06 115 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 A0A1W2PQU0 124 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 PRRG2O14669 202 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 PDE8AO60658 829 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 CLEC3AO75596 197 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 TRHRP34981 398 aaPredicted RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 HK2P52789 917 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 CBX2Q14781 532 aaPredicted RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 KCNA10Q16322 511 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 WWC2Q6AWC2 1192 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 AMIGO3Q86WK7 504 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 KISS1RQ969F8 398 aaPredicted RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 DPH2Q9BQC3 489 aaPredicted RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 AARSD1Q9BTE6 412 aaKnown RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 EPB41L4BQ9H329 900 aa8.68□□□□□ -1.02
RFC1-217ENST00000639695 MRPS23Q9Y3D9 190 aaKnown RBP8.68□□□□□ -1.02
RFC1-217ENST00000639695 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 TMEM253P0C7T8 217 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 CPEP16870 476 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 BUD31P41223 144 aaPredicted RBP8.67□□□□□ -1.02
RFC1-217ENST00000639695 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
RFC1-217ENST00000639695 FAM209AQ5JX71 171 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 JAMLQ86YT9 394 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 HAUS7Q99871 368 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 IER2Q9BTL4 223 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 GBP3Q9H0R5 595 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 ADAMTS10Q9H324 1103 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 SP110Q9HB58 689 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 FAM86C1Q9NVL1 165 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 TCEAL9Q9UHQ7 104 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 MAPRE3Q9UPY8 281 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 FAN1Q9Y2M0 1017 aa8.67□□□□□ -1.02
RFC1-217ENST00000639695 A0A087X0B3 334 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 PMLP29590 882 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 ADAT2Q7Z6V5 191 aaKnown RBP8.66□□□□□ -1.02
RFC1-217ENST00000639695 CCDC144CPQ8IYA2 1237 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 EXOC2Q96KP1 924 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 Q96M66 194 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 MRPL4Q9BYD3 311 aaKnown RBP8.66□□□□□ -1.02
RFC1-217ENST00000639695 ARHGEF4Q9NR80 690 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 INTS7Q9NVH2 962 aaKnown RBP8.66□□□□□ -1.02
RFC1-217ENST00000639695 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
RFC1-217ENST00000639695 B8ZZF3 427 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.02
RFC1-217ENST00000639695 KCNQ2O43526 872 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 PPM1BO75688 479 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 EPHX1P07099 455 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 INHBBP09529 407 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 PPP2R2AP63151 447 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.02
RFC1-217ENST00000639695 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
RFC1-217ENST00000639695 DDX42Q86XP3 938 aaKnown RBP eCLIP8.65□□□□□ -1.02
RFC1-217ENST00000639695 FMNL3Q8IVF7 1028 aa8.65□□□□□ -1.02
RFC1-217ENST00000639695 MAGEC2Q9UBF1 373 aaPredicted RBP8.65□□□□□ -1.02
RFC1-217ENST00000639695 SMG5Q9UPR3 1016 aaKnown RBP8.65□□□□□ -1.02
RFC1-217ENST00000639695 UBOX5O94941 541 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 HPXP02790 462 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 EVA1CP58658 441 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 AHI1Q8N157 1196 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 CYB5D2Q8WUJ1 264 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 MYLIPQ8WY64 445 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 RNF32Q9H0A6 362 aa8.64□□□□□ -1.03
RFC1-217ENST00000639695 SUSD2Q9UGT4 822 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms