RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IFT74Q96LB3 600 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 PDIA6Q15084 440 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 SARM1Q6SZW1 724 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 UBN2Q6ZU65 1347 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 SMCR8Q8TEV9 937 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 MRRFQ96E11 262 aaKnown RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 CLRN2A0PK11 232 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 RASSF7Q02833 373 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 PAK2Q13177 524 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 ADAT2Q7Z6V5 191 aaKnown RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 PPP1R14CQ8TAE6 165 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 NAP1L3Q99457 506 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 GDF11O95390 407 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 CLEC4GQ6UXB4 293 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 SRGAP1Q7Z6B7 1085 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 RABGGTAQ92696 567 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 KIFAP3Q92845 792 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 IQCGQ9H095 443 aaKnown RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 ACTN4O43707 911 aaKnown RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 POLD1P28340 1107 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 GUCY1A2P33402 732 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 CDK8P49336 464 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 ABCB5Q2M3G0 1257 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 GPATCH4Q5T3I0 446 aaKnown RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 AMNQ9BXJ7 453 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 UTP11Q9Y3A2 253 aaKnown RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 TESPA1A2RU30 521 aaPredicted RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 BBOX1O75936 387 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 GNA14O95837 355 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 EEF1GP26641 437 aaKnown RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 EHHADHQ08426 723 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 UBE2SQ16763 222 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 PAXIP1Q6ZW49 1069 aaPredicted RBP15.91■□□□□ 0.14
SCARB2-216ENST00000639300 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 TICAM2Q86XR7 235 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 CCDC127Q96BQ5 260 aa15.91■□□□□ 0.14
SCARB2-216ENST00000639300 TTLL1O95922 423 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 SH3RF3Q8TEJ3 882 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 KAZALD1Q96I82 304 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 BRIP1Q9BX63 1249 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 USTQ9Y2C2 406 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 HYOU1Q9Y4L1 999 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 MEIS1O00470 390 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 HGSO14964 777 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 VIMP08670 466 aaKnown RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 BCRP11274 1271 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 SHC4Q6S5L8 630 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 MIER3Q7Z3K6 550 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 RPGRIP1Q96KN7 1286 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 USP27XA6NNY8 438 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 SORBS3O60504 671 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 CUL4BQ13620 913 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 KRT31Q15323 416 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 LRRC45Q96CN5 670 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 CCDC17Q96LX7 622 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 NSRP1Q9H0G5 558 aaKnown RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 ASIC3Q9UHC3 531 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 ADAMTS13Q76LX8 1427 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 NR2F2P24468 414 aa15.9■□□□□ 0.14
SCARB2-216ENST00000639300 STMN4Q9H169 189 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-216ENST00000639300 UBL4BQ8N7F7 174 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 ANKS4BQ8N8V4 417 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 AK8Q96MA6 479 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 ALDH8A1Q9H2A2 487 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-216ENST00000639300 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCARB2-216ENST00000639300 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 LAD1O00515 517 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 TCP1P17987 556 aaKnown RBP15.89■□□□□ 0.13
SCARB2-216ENST00000639300 CACNB3P54284 484 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 KMT5BQ4FZB7 885 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 ZBED4O75132 1171 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 H2AFZP0C0S5 128 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 CXCR5P32302 372 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 FKBP3Q00688 224 aaKnown RBP15.89■□□□□ 0.13
SCARB2-216ENST00000639300 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 H2AFVQ71UI9 128 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 CEP57Q86XR8 500 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 EXOC7Q9UPT5 735 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 ADGRB1O14514 1584 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 CCNE1P24864 410 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-216ENST00000639300 KRT71Q3SY84 523 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 NIM1KQ8IY84 436 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 CCDC105Q8IYK2 499 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 SLFN12Q8IYM2 578 aa15.89■□□□□ 0.13
SCARB2-216ENST00000639300 FBF1Q8TES7 1133 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms