RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 YIPF3Q9GZM5 350 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 MAST3O60307 1309 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 SLIT3O75094 1523 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 GOLGA6L10A6NI86 522 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 TRIM37O94972 964 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 HOXC9P31274 260 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 ITIH4Q14624 930 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 PPP1R7Q15435 360 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 QPCTQ16769 361 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 C8orf74Q6P047 294 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 MYH7P12883 1935 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 STXBP3O00186 592 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 POLR2DO15514 142 aaKnown RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 A1BGP04217 495 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 VIMP08670 466 aaKnown RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 ATP4AP20648 1035 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 CDK17Q00537 523 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 IFI16Q16666 785 aaKnown RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 RABL6Q3YEC7 729 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 SMCR8Q8TEV9 937 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 BICD1Q96G01 975 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
CAPN3-221ENST00000638141 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
CAPN3-221ENST00000638141 ORC4O43929 436 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 ZFYP08048 801 aaPredicted RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 CNGA1P29973 690 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 TFCP2Q12800 502 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 SGSM1Q2NKQ1 1148 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 CACNA2D4Q7Z3S7 1137 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 NCAPG2Q86XI2 1143 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 B4GALNT2Q8NHY0 566 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 LRRC59Q96AG4 307 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 GPR75-ASB3A0A0A6YYF3 556 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 DRD4P21917 467 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 WDR59Q6PJI9 974 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 MAATS1Q7Z4T9 603 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 ARHGAP22Q7Z5H3 698 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 ATL2Q8NHH9 583 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 FAM81AQ8TBF8 368 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 AGAP11Q8TF27 550 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 LUC7L2Q9Y383 392 aaKnown RBP13.29□□□□□ -0.28
CAPN3-221ENST00000638141 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 SPATA31A3Q5VYP0 1347 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 NID2Q14112 1375 aa13.29□□□□□ -0.28
CAPN3-221ENST00000638141 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 TACC1O75410 805 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
CAPN3-221ENST00000638141 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 LMCD1Q9NZU5 365 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 NFAT5O94916 1531 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-221ENST00000638141 MYZAPP0CAP1 466 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 GNAT1P11488 350 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 PAFAH1B1P43034 410 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 PPP2R2AP63151 447 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 KIF5AQ12840 1032 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 EPAS1Q99814 870 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
CAPN3-221ENST00000638141 LACRTQ9GZZ8 138 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-221ENST00000638141 AATFQ9NY61 560 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAPN3-221ENST00000638141 RWDD2AQ9UIY3 292 aa13.28□□□□□ -0.28
CAPN3-221ENST00000638141 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.28
CAPN3-221ENST00000638141 TTC26A0AVF1 554 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ASAP2O43150 1006 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 RNF8O76064 485 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms