RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 H3BRJ5 948 aa16.4■□□□□ 0.22
UBE3A-227ENST00000638011 TRIM59Q8IWR1 403 aa16.4■□□□□ 0.22
UBE3A-227ENST00000638011 GRAMD1AQ96CP6 724 aa16.4■□□□□ 0.22
UBE3A-227ENST00000638011 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
UBE3A-227ENST00000638011 IQANK1A0A1B0GTG1 560 aa16.39■□□□□ 0.22
UBE3A-227ENST00000638011 SLC13A4Q9UKG4 626 aa16.39■□□□□ 0.22
UBE3A-227ENST00000638011 CAV1Q03135 178 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 KRT25Q7Z3Z0 450 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■■■■□ 21.4
UBE3A-227ENST00000638011 PPP1R13BQ96KQ4 1090 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 CUEDC2Q9H467 287 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 ZNF229Q9UJW7 825 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 MSH2P43246 934 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 BASP1P80723 227 aaKnown RBP16.39■□□□□ 0.21
UBE3A-227ENST00000638011 SPARCL1Q14515 664 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 DDX28Q9NUL7 540 aaKnown RBP16.39■□□□□ 0.21
UBE3A-227ENST00000638011 ARHGEF35A5YM69 484 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 CARSP49589 748 aaKnown RBP16.39■□□□□ 0.21
UBE3A-227ENST00000638011 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 AOC3Q16853 763 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 PSMB7Q99436 277 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 GID8Q9NWU2 228 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 NPR1P16066 1061 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-227ENST00000638011 PODXLO00592 558 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 ZNF189O75820 626 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-227ENST00000638011 KLC1Q07866 573 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
UBE3A-227ENST00000638011 CYP7A1P22680 504 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 CHMLP26374 656 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 GUCY1A3Q02108 690 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 KIRREL3Q8IZU9 778 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 ADCY3O60266 1144 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 GCNT3O95395 438 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 BRDTQ58F21 947 aaPredicted RBP16.38■□□□□ 0.21
UBE3A-227ENST00000638011 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
UBE3A-227ENST00000638011 NESP48681 1621 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 FOXP2O15409 715 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 TFAP4Q01664 338 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 TUBGCP3Q96CW5 907 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 DACH2Q96NX9 599 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 ATP11BQ9Y2G3 1177 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 PDE1BQ01064 536 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 CNGA3Q16281 694 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 GALNT17Q6IS24 598 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 LMBRD1Q9NUN5 540 aa16.38■□□□□ 0.21
UBE3A-227ENST00000638011 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
UBE3A-227ENST00000638011 SLC44A4Q53GD3 710 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 NUP160Q12769 1436 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-227ENST00000638011 SERPINB1P30740 379 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 IQCB1Q15051 598 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 GOLGA8TH3BQL2 631 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3A-227ENST00000638011 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 MORC3Q14149 939 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 MORF4L2Q15014 288 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3A-227ENST00000638011 NACA2Q9H009 215 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 SUCLA2Q9P2R7 463 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-227ENST00000638011 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 KCTD16Q68DU8 428 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 GSNP06396 782 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
UBE3A-227ENST00000638011 BACH1O14867 736 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 C1orf112Q9NSG2 853 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 F6X3S4 739 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 TRMT10CQ7L0Y3 403 aaKnown RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 WDR75Q8IWA0 830 aaKnown RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 PARVBQ9HBI1 364 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 PRR23D1E9PI22 279 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 PRR23D2P0DMB1 279 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 NAF1Q96HR8 494 aaKnown RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 BFSP1Q12934 665 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 PARP9Q8IXQ6 854 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 ANKRD27Q96NW4 1050 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 EXOC1LA0A1B0GW35 172 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 EXOC3O60645 756 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 ATF7P17544 494 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-227ENST00000638011 NNTQ13423 1086 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 RAPH1Q70E73 1250 aa16.36■□□□□ 0.21
UBE3A-227ENST00000638011 SYBUQ9NX95 663 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms