RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	KIF28P	B7ZC32	967 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	PPP1R37	O75864	691 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	GCFC2	P16383	781 aa	Known RBP	13.42	□□□□□ -0.26
PXN-222	ENST00000637624	NCAPH	Q15003	741 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	TTC38	Q5R3I4	469 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	IFIT1B	Q5T764	474 aa	Known RBP	13.42	□□□□□ -0.26
PXN-222	ENST00000637624	STOX1	Q6ZVD7	989 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	CCDC26	Q8TAB7	109 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	STAG1	Q8WVM7	1258 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	KLHL29	Q96CT2	875 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	TRIM7	Q9C029	511 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	CCNL1	Q9UK58	526 aa	Predicted RBP	13.42	□□□□□ -0.26
PXN-222	ENST00000637624	USP54	Q70EL1	1684 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	DNM2	P50570	870 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	RASSF7	Q02833	373 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	TSNAXIP1	Q2TAA8	658 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	DTHD1	Q6ZMT9	781 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	MSANTD4	Q8NCY6	345 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	TMEM87B	Q96K49	555 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	LRRC1	Q9BTT6	524 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	ABCC6	O95255	1503 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	PPP1R12A	O14974	1030 aa	Predicted RBP	13.42	□□□□□ -0.26
PXN-222	ENST00000637624	USP5	P45974	858 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	POLE2	P56282	527 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	RPS6KA1	Q15418	735 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	SMIM5	Q71RC9	77 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	ANKRD42	Q8N9B4	389 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	CALR3	Q96L12	384 aa	Known RBP	13.42	□□□□□ -0.26
PXN-222	ENST00000637624	CNNM2	Q9H8M5	875 aa		13.42	□□□□□ -0.26
PXN-222	ENST00000637624	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	TMTC2	Q8N394	836 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	IL17RA	Q96F46	866 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	SERPINA10	Q9UK55	444 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	HEG1	Q9ULI3	1381 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	PARP1	P09874	1014 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	LSP1	P33241	339 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	TAF11	Q15544	211 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	RESP18	Q5W5W9	173 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	HOOK3	Q86VS8	718 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	ZNF473	Q8WTR7	871 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	PCDHB6	Q9Y5E3	794 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	SALL3	Q9BXA9	1300 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	RGS16	O15492	202 aa	Predicted RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	GBP1	P32455	592 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	IRX1	P78414	480 aa	Predicted RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	CTDSPL2	Q05D32	466 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	SLC9C1	Q4G0N8	1177 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	ADAT2	Q7Z6V5	191 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	MIGA1	Q8NAN2	632 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	GSDMA	Q96QA5	445 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	SLC40A1	Q9NP59	571 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	UTP11	Q9Y3A2	253 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	CDHR2	Q9BYE9	1310 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	APOA5	Q6Q788	366 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	RPUSD2	Q8IZ73	545 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	RNF10	Q8N5U6	811 aa	Known RBP	13.41	□□□□□ -0.26
PXN-222	ENST00000637624	MAST3	O60307	1309 aa		13.41	□□□□□ -0.26
PXN-222	ENST00000637624	TNS2	Q63HR2	1409 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	RGPD1	P0DJD0	1748 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	ZAP70	P43403	619 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	ZBTB16	Q05516	673 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	PPFIBP2	Q8ND30	876 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	HVCN1	Q96D96	273 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	TRIM4	Q9C037	500 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	STMN4	Q9H169	189 aa	Predicted RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	PLAA	Q9Y263	795 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	ZMYM6	O95789	1325 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624		H7C1D1	291 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	FTCD	O95954	541 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	APBA3	O96018	575 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	COL9A3	Q14050	684 aa	Predicted RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	NAA35	Q5VZE5	725 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	RASGRP2	Q7LDG7	609 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	ESR2	Q92731	530 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	ARHGEF2	Q92974	986 aa	Known RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	TSC22D3	Q99576	134 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	TUBGCP2	Q9BSJ2	902 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	VCX	Q9H320	206 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	NOP53	Q9NZM5	478 aa	Known RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	COL18A1	P39060	1754 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	PRDM1	O75626	825 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	KCNV2	Q8TDN2	545 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.4	□□□□□ -0.26
PXN-222	ENST00000637624	VAT1L	Q9HCJ6	419 aa		13.4	□□□□□ -0.26
PXN-222	ENST00000637624	PALLD	Q8WX93	1383 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	TTC26	A0AVF1	554 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	GMNC	A6NCL1	334 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	CTDNEP1	O95476	244 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	MUM1	Q2TAK8	710 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	GRIPAP1	Q4V328	841 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	NFRKB	Q6P4R8	1299 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	PTF1A	Q7RTS3	328 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	CCDC13	Q8IYE1	715 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	ARL8A	Q96BM9	186 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	SH3GL3	Q99963	347 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	SMARCAL1	Q9NZC9	954 aa		13.39	□□□□□ -0.27
PXN-222	ENST00000637624	MTRF1L	Q9UGC7	380 aa	Known RBP	13.39	□□□□□ -0.27
PXN-222	ENST00000637624	EYA2	O00167	538 aa		13.39	□□□□□ -0.27

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