RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 ESR2Q92731 530 aa26.83■■□□□ 1.89
CHRNA7-229ENST00000637552 KATNBL1Q9H079 304 aa26.83■■□□□ 1.89
CHRNA7-229ENST00000637552 UPF3AQ9H1J1 476 aaKnown RBP26.83■■□□□ 1.89
CHRNA7-229ENST00000637552 CYP39A1Q9NYL5 469 aa26.83■■□□□ 1.89
CHRNA7-229ENST00000637552 LAMA4Q16363 1823 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 DCDC2CA8MYV0 355 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 HIP1O00291 1037 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 RAG1P15918 1043 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 GJA9P57773 515 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 TTC14Q96N46 770 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 TMEM39AQ9NV64 488 aa26.82■■□□□ 1.88
CHRNA7-229ENST00000637552 ZNF213O14771 459 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 ASGR1P07306 291 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 PDHBP11177 359 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 TNFAIP2Q03169 654 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 SHHQ15465 462 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 GNASQ5JWF2 1037 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 ANKRD33Q7Z3H0 272 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 VTI1AQ96AJ9 217 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 TOX2Q96NM4 488 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 NEDD4P46934 1319 aa26.81■■□□□ 1.88
CHRNA7-229ENST00000637552 LRRC37A2A6NM11 1700 aa26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 KIAA0355O15063 1070 aa26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 IRX5P78411 483 aaPredicted RBP26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 C9orf50Q5SZB4 431 aa26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 ELP1O95163 1332 aa26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 MROH7Q68CQ1 1323 aa26.8■■□□□ 1.88
CHRNA7-229ENST00000637552 MTMR10Q9NXD2 777 aa26.79■■□□□ 1.88
CHRNA7-229ENST00000637552 ASTN1O14525 1302 aa26.79■■□□□ 1.88
CHRNA7-229ENST00000637552 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 ITGB8P26012 769 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 ZNF543Q08ER8 600 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 EEPD1Q7L9B9 569 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 ZKSCAN3Q9BRR0 538 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 PNMA2Q9UL42 364 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 LCTP09848 1927 aa26.78■■□□□ 1.88
CHRNA7-229ENST00000637552 A0A0U1RQG5 324 aaPredicted RBP26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 NT5C2P49902 561 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 FAAP100Q0VG06 881 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 TLK2Q86UE8 772 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 IQCA1Q86XH1 822 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 FBXO16Q8IX29 292 aaPredicted RBP26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 AP5M1Q9H0R1 490 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 ADD3Q9UEY8 706 aaKnown RBP26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 DDX49Q9Y6V7 483 aaKnown RBP26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 COL6A3P12111 3177 aa26.77■■□□□ 1.88
CHRNA7-229ENST00000637552 LAMA2P24043 3122 aaKnown RBP26.76■■□□□ 1.88
CHRNA7-229ENST00000637552 PTPDC1A2A3K4 754 aa26.76■■□□□ 1.87
CHRNA7-229ENST00000637552 NFIBO00712 420 aa26.76■■□□□ 1.87
CHRNA7-229ENST00000637552 BEX3Q00994 111 aa26.76■■□□□ 1.87
CHRNA7-229ENST00000637552 BAATQ14032 418 aaPredicted RBP26.76■■□□□ 1.87
CHRNA7-229ENST00000637552 CCDC178Q5BJE1 867 aa26.76■■□□□ 1.87
CHRNA7-229ENST00000637552 KDM4AO75164 1064 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 SNHG28P0DPA3 235 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 FPGSQ05932 587 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 IMMTQ16891 758 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 GPATCH4Q5T3I0 446 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 FAM109BQ6ICB4 259 aaPredicted RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 DGKHQ86XP1 1220 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 SLC17A8Q8NDX2 589 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 PURBQ96QR8 312 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 DSCC1Q9BVC3 393 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 VTA1Q9NP79 307 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 GNEQ9Y223 722 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 STXBP5LQ9Y2K9 1186 aa26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 SUPT16HQ9Y5B9 1047 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-229ENST00000637552 ARVCFO00192 962 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 CTAGE5O15320 804 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 NKX3-2P78367 333 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 ZNF697Q5TEC3 545 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 IQSEC1Q6DN90 963 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 PDGFCQ9NRA1 345 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 CTNNA3Q9UI47 895 aa26.74■■□□□ 1.87
CHRNA7-229ENST00000637552 WDR19Q8NEZ3 1342 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 TLR3O15455 904 aaKnown RBP26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 SMPD1P17405 629 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 CALML3P27482 149 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 CDK7P50613 346 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 ALDH5A1P51649 535 aaPredicted RBP26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 FSCN1Q16658 493 aaKnown RBP26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 TAPT1Q6NXT6 567 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 PNMA1Q8ND90 353 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 RNPC3Q96LT9 517 aaKnown RBP26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 KAT14Q9H8E8 782 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 TBX21Q9UL17 535 aa26.73■■□□□ 1.87
CHRNA7-229ENST00000637552 B4E1Z4 1266 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 DYNC1LI2O43237 492 aaPredicted RBP26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 ZEB2O60315 1214 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 CABYRO75952 493 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 GOLGA8HP0CJ92 632 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 CXCL17Q6UXB2 119 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 SLC30A10Q6XR72 485 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 RNF207Q6ZRF8 634 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 KIAA1211Q6ZU35 1233 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 MORC4Q8TE76 937 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 FAM161BQ96MY7 647 aa26.72■■□□□ 1.87
CHRNA7-229ENST00000637552 LOC102724159A0A0B4J2E5 919 aa26.71■■□□□ 1.87
CHRNA7-229ENST00000637552 TIMP1P01033 207 aa26.71■■□□□ 1.87
CHRNA7-229ENST00000637552 PWP2Q15269 919 aaKnown RBP26.71■■□□□ 1.87
CHRNA7-229ENST00000637552 CLEC4DQ8WXI8 215 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms