RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 FBXO11Q86XK2 927 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 CHST13Q8NET6 341 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 RRP36Q96EU6 259 aaKnown RBP19.94■□□□□ 0.78
CLN6-218ENST00000637223 MMP19Q99542 508 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 NUDT12Q9BQG2 462 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 PTCH2Q9Y6C5 1203 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 COL11A1P12107 1806 aaPredicted RBP19.94■□□□□ 0.78
CLN6-218ENST00000637223 CCDC196A0A1B0GTZ2 297 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 hCG_1642624A0A1W2PR95 340 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 SLC15A5A6NIM6 579 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 PPP1R11O60927 126 aaPredicted RBP19.93■□□□□ 0.78
CLN6-218ENST00000637223 FCER1AP12319 257 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 GRB14Q14449 540 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 RAET1EQ8TD07 263 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 ACAD9Q9H845 621 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 FBXO40Q9UH90 709 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 CNTNAP5Q8WYK1 1306 aa19.93■□□□□ 0.78
CLN6-218ENST00000637223 PNMA6FA0A0J9YX94 578 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 STRNO43815 780 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 CYP2B6P20813 491 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 ADORA2AP29274 412 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 PRMT2P55345 433 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 FUT2Q10981 343 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 KCTD2Q14681 263 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 PPP2R5BQ15173 497 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 AMNQ9BXJ7 453 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 SEC63Q9UGP8 760 aaKnown RBP19.92■□□□□ 0.78
CLN6-218ENST00000637223 PNMA2Q9UL42 364 aa19.92■□□□□ 0.78
CLN6-218ENST00000637223 HTTP42858 3142 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 H0YGN5 161 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 NFIBO00712 420 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 PPFIA3O75145 1194 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 LARGE1O95461 756 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 PGK2P07205 417 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 RGS2P41220 211 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 MAP2K5Q13163 448 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 ABRAQ8N0Z2 381 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 ANKRD35Q8N283 1001 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 USP6NLQ92738 828 aa19.91■□□□□ 0.78
CLN6-218ENST00000637223 SLKQ9H2G2 1235 aaPredicted RBP19.91■□□□□ 0.78
CLN6-218ENST00000637223 PFKFB2O60825 505 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 SCRN1Q12765 414 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 ME3Q16798 604 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 NSMFQ6X4W1 530 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 DPP9Q86TI2 863 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 CLEC4DQ8WXI8 215 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 DDX11Q96FC9 970 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 ZNF333Q96JL9 665 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 PCDHA1Q9Y5I3 950 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 V9GY48 417 aaPredicted RBP19.9■□□□□ 0.78
CLN6-218ENST00000637223 ABCB11O95342 1321 aa19.9■□□□□ 0.78
CLN6-218ENST00000637223 DLL1O00548 723 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 COBLO75128 1261 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 NECAB1Q8N987 351 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 PHKBQ93100 1093 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 APBA2Q99767 749 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 TRIOBPQ9H2D6 2365 aa19.89■□□□□ 0.77
CLN6-218ENST00000637223 A1CFQ9NQ94 594 aaKnown RBP19.89■□□□□ 0.77
CLN6-218ENST00000637223 MRPL11Q9Y3B7 192 aaKnown RBP19.89■□□□□ 0.77
CLN6-218ENST00000637223 CPLX1O14810 134 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 ADCY3O60266 1144 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 ST18O60284 1047 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 MYCP01106 439 aaPredicted RBP19.88■□□□□ 0.77
CLN6-218ENST00000637223 ELNP15502 786 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 IRF5Q13568 498 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 NTRK3Q16288 839 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLN6-218ENST00000637223 NPLOC4Q8TAT6 608 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 LIMCH1Q9UPQ0 1083 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 MGAMO43451 1857 aa19.88■□□□□ 0.77
CLN6-218ENST00000637223 CENPFP49454 3210 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 IFNAR1P17181 557 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 CCL14Q16627 93 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 SLC9C1Q4G0N8 1177 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 HEATR3Q7Z4Q2 680 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 SH3TC2Q8TF17 1288 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 GPKOWQ92917 476 aaPredicted RBP eCLIP19.87■□□□□ 0.77
CLN6-218ENST00000637223 SLC26A6Q9BXS9 759 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 CYP39A1Q9NYL5 469 aa19.87■□□□□ 0.77
CLN6-218ENST00000637223 PFASO15067 1338 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 POTEB2H3BUK9 544 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 DTNBO60941 627 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 HOXC6P09630 235 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 XRCC5P13010 732 aaKnown RBP19.86■□□□□ 0.77
CLN6-218ENST00000637223 GRK4P32298 578 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 TRAF1Q13077 416 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
CLN6-218ENST00000637223 ZNF792Q3KQV3 632 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 CPLX2Q6PUV4 134 aaKnown RBP19.86■□□□□ 0.77
CLN6-218ENST00000637223 CHRDL2Q6WN34 429 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 SLC30A10Q6XR72 485 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 RNF207Q6ZRF8 634 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 TBC1D5Q92609 795 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 GTF3C6Q969F1 213 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 SLC5A4Q9NY91 659 aa19.86■□□□□ 0.77
CLN6-218ENST00000637223 DNAJC25-GNG10A0A024R161 153 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 OPLAHO14841 1288 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 PRPF3O43395 683 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms