RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 CASQ1P31415 396 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
CLN8-212ENST00000637083 GOLGA8FQ08AF8 430 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 GOLGA8DPQ0D2H9 430 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 C7orf25Q9BPX7 421 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
CLN8-212ENST00000637083 F8W031 263 aaPredicted RBP13.62□□□□□ -0.23
CLN8-212ENST00000637083 AKR1B1P15121 316 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 EXOC1Q9NV70 894 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
CLN8-212ENST00000637083 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 GDAQ9Y2T3 454 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 NRXN2Q9P2S2 1712 aa13.62□□□□□ -0.23
CLN8-212ENST00000637083 MMP10P09238 476 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 PLCG1P19174 1290 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLN8-212ENST00000637083 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 PDIA5Q14554 519 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CALCRLQ16602 461 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 JAKMIP3Q5VZ66 844 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CPVLQ9H3G5 476 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 FRMPD2Q68DX3 1309 aaPredicted RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 A0A1W2PQC6 194 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 PP2D1A8MPX8 630 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 KLRC4O43908 158 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 URI1O94763 535 aaPredicted RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 FECHP22830 423 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CASP14P31944 242 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CCT6AP40227 531 aaKnown RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 GNG11P61952 73 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 DOK7Q18PE1 504 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 VPS16Q9H269 839 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 RIC8AQ9NPQ8 531 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 LRWD1Q9UFC0 647 aa13.61□□□□□ -0.23
CLN8-212ENST00000637083 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
CLN8-212ENST00000637083 TECP42680 631 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 UBXN1Q04323 297 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 PDE4DQ08499 809 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 TUBB2AQ13885 445 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
CLN8-212ENST00000637083 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 CYP26C1Q6V0L0 522 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 SV2BQ7L1I2 683 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 CUL5Q93034 780 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 NUP88Q99567 741 aaPredicted RBP13.6□□□□□ -0.23
CLN8-212ENST00000637083 TUBB2BQ9BVA1 445 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
CLN8-212ENST00000637083 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
CLN8-212ENST00000637083 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 GYPCP04921 128 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 GCFC2P16383 781 aaKnown RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 CCNE1P24864 410 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 SHMT1P34896 483 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 CRKP46108 304 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ASIC1P78348 528 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 UBXN4Q92575 508 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ADGRG1Q9Y653 693 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ZBTB5O15062 677 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 KIF5CO60282 957 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 TXKP42681 527 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 DNM2P50570 870 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ZNF772Q68DY9 489 aaPredicted RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 APOBEC3HQ6NTF7 200 aaKnown RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 P2RX5Q93086 422 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 COA7Q96BR5 231 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 PLIN2Q99541 437 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 NUP58Q9BVL2 599 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms