RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 TTMPQ5BVD1 217 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 HDAC7Q8WUI4 952 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 ARL8AQ96BM9 186 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 SHISA4Q96DD7 197 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 PAGR1Q9BTK6 254 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 THRAP3Q9Y2W1 955 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 PSMA7O14818 248 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 PHKA1P46020 1223 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 TIAM2Q8IVF5 1701 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 TTYH3Q9C0H2 523 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 AGPAT5Q9NUQ2 364 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 DUSP10Q9Y6W6 482 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 WNT7AO00755 349 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 CLSTN1O94985 981 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 ITGA6P23229 1130 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 SEMA3FQ13275 785 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 CCDC96Q2M329 555 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 CCDC42Q96M95 316 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 TRIM49BA6NDI0 452 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 PDE8BO95263 885 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 PAFAH1B1P43034 410 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 TNFRSF25Q93038 417 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 CEP83Q9Y592 693 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 B4DLN1 442 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 CYP27A1Q02318 531 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 GLE1Q53GS7 698 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 TSEN2Q8NCE0 465 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 IQCDQ96DY2 449 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 ALS2CR12Q96Q35 445 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 EPN3Q9H201 632 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 DONSONQ9NYP3 566 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.36
CACNA1A-235ENST00000637004 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 STAT6P42226 847 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 TBC1D8BQ0IIM8 1120 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 KCNB1Q14721 858 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 KDM7AQ6ZMT4 941 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 TUBGCP2Q9BSJ2 902 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 RBM28Q9NW13 759 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 PRDM1O75626 825 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 TRIM37O94972 964 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 LONP1P36776 959 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 ESR2Q92731 530 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 OSBPL9Q96SU4 736 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 LRWD1Q9UFC0 647 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 TNKSO95271 1327 aa17.32■□□□□ 0.36
CACNA1A-235ENST00000637004 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 MYO1FO00160 1098 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 CHUKO15111 745 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 LSP1P33241 339 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 FUT2Q10981 343 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 EMC10Q5UCC4 262 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 ARL6IP4Q66PJ3 421 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 PCMTD1Q96MG8 357 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 ZIM3Q96PE6 472 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 IFIH1Q9BYX4 1025 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 MYL1P05976 194 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 GPTP24298 496 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 NAP1L1P55209 391 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 KCNQ4P56696 695 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 SEC23AQ15436 765 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 CFAP58Q5T655 872 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 CATIPQ7Z7H3 387 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 IFT20Q8IY31 132 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 JPH2Q9BR39 696 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 GGA2Q9UJY4 613 aa17.31■□□□□ 0.36
CACNA1A-235ENST00000637004 PRKAB2O43741 272 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 PPARAQ07869 468 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 PLCB4Q15147 1175 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 HAUS3Q68CZ6 603 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 EP400NLQ6ZTU2 488 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 CCDC155Q8N6L0 562 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 GREM2Q9H772 168 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 ATP1A2P50993 1020 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 NAA35Q5VZE5 725 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 LPIN2Q92539 896 aa17.3■□□□□ 0.36
CACNA1A-235ENST00000637004 CALM1P0DP23 149 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 CALM2P0DP24 149 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 CALM3P0DP25 149 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 MCM7P33993 719 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms