RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 ARHGAP39Q9C0H5 1083 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 ABCB11O95342 1321 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
CLN6-216ENST00000636876 FCGRTP55899 365 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 CAP1Q01518 475 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 SSRP1Q08945 709 aaKnown RBP18.49■□□□□ 0.55
CLN6-216ENST00000636876 WDR78Q5VTH9 848 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN6-216ENST00000636876 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 NSUN7Q8NE18 718 aaKnown RBP18.49■□□□□ 0.55
CLN6-216ENST00000636876 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 MCOLN1Q9GZU1 580 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 CWC22Q9HCG8 908 aaKnown RBP18.49■□□□□ 0.55
CLN6-216ENST00000636876 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 PCDHA1Q9Y5I3 950 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 MGAMO43451 1857 aa18.49■□□□□ 0.55
CLN6-216ENST00000636876 TNPO2O14787 897 aaKnown RBP18.48■□□□□ 0.55
CLN6-216ENST00000636876 PKN1Q16512 942 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
CLN6-216ENST00000636876 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 GPR142Q7Z601 462 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 CLEC4DQ8WXI8 215 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 COA7Q96BR5 231 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
CLN6-216ENST00000636876 DOCK3Q8IZD9 2030 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 STK36Q9NRP7 1315 aa18.48■□□□□ 0.55
CLN6-216ENST00000636876 SCG2P13521 617 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 PTPREP23469 700 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 ARHGEF6Q15052 776 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 HEATR3Q7Z4Q2 680 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 ABRAQ8N0Z2 381 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 GPKOWQ92917 476 aaPredicted RBP eCLIP18.47■□□□□ 0.55
CLN6-216ENST00000636876 LLPHQ9BRT6 129 aaKnown RBP18.47■□□□□ 0.55
CLN6-216ENST00000636876 IVNS1ABPQ9Y6Y0 642 aa18.47■□□□□ 0.55
CLN6-216ENST00000636876 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 SLC15A5A6NIM6 579 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 hCG_1984214I3L0E3 225 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
CLN6-216ENST00000636876 NFIBO00712 420 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 STRNO43815 780 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 JAK2O60674 1132 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 DTNBO60941 627 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 DEXIO95424 95 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 FCER1AP12319 257 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 WWC2Q6AWC2 1192 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 HSCBQ8IWL3 235 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 ZNF713Q8N859 430 aaPredicted RBP18.46■□□□□ 0.55
CLN6-216ENST00000636876 MMP19Q99542 508 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 BARHL2Q9NY43 387 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 ORC3Q9UBD5 711 aaPredicted RBP18.46■□□□□ 0.55
CLN6-216ENST00000636876 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
CLN6-216ENST00000636876 STXBP3O00186 592 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 OPLAHO14841 1288 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 GNRH1P01148 92 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 CUL4AQ13619 759 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 GRB14Q14449 540 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 KCTD2Q14681 263 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 MORN1Q5T089 497 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
CLN6-216ENST00000636876 A1CFQ9NQ94 594 aaKnown RBP18.45■□□□□ 0.54
CLN6-216ENST00000636876 ZNF236Q9UL36 1845 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
CLN6-216ENST00000636876 HOXD10P28358 340 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 ADORA2AP29274 412 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 NSMFQ6X4W1 530 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 MCF2L2Q86YR7 1114 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 ANKRD35Q8N283 1001 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 RGS22Q8NE09 1264 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 SOCS4Q8WXH5 440 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 MAF1Q9H063 256 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 GJD2Q9UKL4 321 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 PFASO15067 1338 aa18.44■□□□□ 0.54
CLN6-216ENST00000636876 NAPAP54920 295 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
CLN6-216ENST00000636876 TYW1BQ6NUM6 668 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 OTOP1Q7RTM1 612 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 WASF1Q92558 559 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 USP6NLQ92738 828 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 NUDT12Q9BQG2 462 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 CYP39A1Q9NYL5 469 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 SRRDQ9UH36 339 aa18.43■□□□□ 0.54
CLN6-216ENST00000636876 ZNFX1Q9P2E3 1918 aaKnown RBP18.43■□□□□ 0.54
CLN6-216ENST00000636876 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
CLN6-216ENST00000636876 DNAJC25-GNG10A0A024R161 153 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 GHRHRQ02643 423 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 PRKCZQ05513 592 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 BAATQ14032 418 aaPredicted RBP18.42■□□□□ 0.54
CLN6-216ENST00000636876 CCDC12Q8WUD4 166 aaPredicted RBP18.42■□□□□ 0.54
CLN6-216ENST00000636876 TBC1D5Q92609 795 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 SH3GLB2Q9NR46 395 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms