RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	NID2	Q14112	1375 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	ECM29	Q5VYK3	1845 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	SOWAHD	A6NJG2	315 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	HSF2BP	O75031	334 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	FAM107A	O95990	144 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	FER	P16591	822 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	LIFR	P42702	1097 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	METAP2	P50579	478 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	BCAM	P50895	628 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	RBM5	P52756	815 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	ANTXR2	P58335	489 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	PSMD2	Q13200	908 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	KCNB1	Q14721	858 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	MTF1	Q14872	753 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	PPP4R3A	Q6IN85	833 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	NLRP14	Q86W24	1093 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	TBC1D10C	Q8IV04	446 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	TMTC2	Q8N394	836 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	RASSF8	Q8NHQ8	419 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	ZFAND2B	Q8WV99	257 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	WASF1	Q92558	559 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	C8orf76	Q96K31	380 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	SCLT1	Q96NL6	688 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	RUFY1	Q96T51	708 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	SLC39A2	Q9NP94	309 aa		11.97	□□□□□ -0.49
CHD2-223	ENST00000636306	MAGEB6P1	A0A0J9YX57	407 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	FRMD3	A2A2Y4	597 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	PSMD14	O00487	310 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	CTDNEP1	O95476	244 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	CYP7A1	P22680	504 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	RFC4	P35249	363 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	GCLC	P48506	637 aa	Predicted RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	RPS8	P62241	208 aa	Known RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	PDCL	Q13371	301 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	AKNAD1	Q5T1N1	836 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	PAPD7	Q5XG87	772 aa	Known RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	NFXL1	Q6ZNB6	911 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	BICDL1	Q6ZP65	573 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	MFSD6	Q6ZSS7	791 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	BZW1	Q7L1Q6	419 aa	Known RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	SGMS1	Q86VZ5	419 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	RBM12B	Q8IXT5	1001 aa	Known RBP	11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	MYCBPAP	Q8TBZ2	947 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	CCT8L2	Q96SF2	557 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	MINPP1	Q9UNW1	487 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	SLC4A4	Q9Y6R1	1079 aa		11.96	□□□□□ -0.49
CHD2-223	ENST00000636306	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.96	□□□□□ -0.5
CHD2-223	ENST00000636306	AFF2	P51816	1311 aa		11.96	□□□□□ -0.5
CHD2-223	ENST00000636306	STK36	Q9NRP7	1315 aa		11.96	□□□□□ -0.5
CHD2-223	ENST00000636306	CACNA1S	Q13698	1873 aa		11.96	□□□□□ -0.5
CHD2-223	ENST00000636306	UBR3	Q6ZT12	1888 aa		11.96	□□□□□ -0.5
CHD2-223	ENST00000636306		A0A0G2JLW4	131 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306		A0A1B0GTH6	734 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ZBTB43	O43298	467 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	PPP1R37	O75864	691 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	IMPDH2	P12268	514 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	PFKFB1	P16118	471 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TNFRSF8	P28908	595 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	IFT88	Q13099	833 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIM29	Q14134	588 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TMEM67	Q5HYA8	995 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	EMB	Q6PCB8	327 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	SLC30A9	Q6PML9	568 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	CHST3	Q7LGC8	479 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	CNGA4	Q8IV77	575 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	EHBP1	Q8NDI1	1231 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	CUL5	Q93034	780 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ANKRD27	Q96NW4	1050 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ARMT1	Q9H993	441 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	NCOA5	Q9HCD5	579 aa	Known RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	C15orf41	Q9Y2V0	281 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	GOLGA8A	A7E2F4	631 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ROR2	Q01974	943 aa	Known RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ITIH3	Q06033	890 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	PPP2R5B	Q15173	497 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	E2F5	Q15329	346 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TTMP	Q5BVD1	217 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ANKRD20A8P	Q5CZ79	823 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TRAPPC3L	Q5T215	181 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	NCAPH2	Q6IBW4	605 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	APOA5	Q6Q788	366 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ARMC9	Q7Z3E5	817 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIM74	Q86UV6	250 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIM73	Q86UV7	250 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	CD302	Q8IX05	232 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	MMGT1	Q8N4V1	131 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	MLKL	Q8NB16	471 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	CAVIN3	Q969G5	261 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ALS2CR12	Q96Q35	445 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	HPSE	Q9Y251	543 aa		11.95	□□□□□ -0.5
CHD2-223	ENST00000636306	ITIH6	Q6UXX5	1313 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	DLEC1	Q9Y238	1755 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	GSG1L2	A8MUP6	293 aa		11.94	□□□□□ -0.5

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