RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 NLRP12P59046 1061 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PPP2CBP62714 309 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PPP2CAP67775 309 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 FOXO4P98177 505 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CENPCQ03188 943 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 FMR1Q06787 632 aaKnown RBP eCLIP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 RESTQ13127 1097 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ADAM15Q13444 863 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TRA2AQ13595 282 aaKnown RBP eCLIP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 RIN1Q13671 783 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PCOLCEQ15113 449 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PTPAQ15257 358 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ASIC2Q16515 512 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PLK5Q496M5 336 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 METTL24Q5JXM2 366 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TBC1D9BQ66K14 1250 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ZNF626Q68DY1 528 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 KRT39Q6A163 491 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ZSCAN25Q6NSZ9 544 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TCTN3Q6NUS6 607 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ZNF343Q6P1L6 599 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ZNF449Q6P9G9 518 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TXNDC11Q6PKC3 985 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 SEZ6L2Q6UXD5 910 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TTLL7Q6ZT98 887 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TMC6Q7Z403 805 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 MRGPREQ86SM8 312 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 IFNLR1Q8IU57 520 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 SIRT2Q8IXJ6 389 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 OXR1Q8N573 874 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 C2CD4AQ8NCU7 369 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 SMG8Q8ND04 991 aaKnown RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 PDZD8Q8NEN9 1154 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 DENND1AQ8TEH3 1009 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CLP1Q92989 425 aaKnown RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 AIDAQ96BJ3 306 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 FAM84BQ96KN1 310 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 EBF4Q9BQW3 602 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ESYT1Q9BSJ8 1104 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CARD14Q9BXL6 1004 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 NRDE2Q9H7Z3 1164 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 SGK2Q9HBY8 427 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CYP4F12Q9HCS2 524 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 RPS10P5Q9NQ39 176 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TRMT13Q9NUP7 481 aaKnown RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 AURKAIP1Q9NWT8 199 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 TMEM260Q9NX78 707 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 GPRC5BQ9NZH0 403 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 SCHIP1Q9P0W5 487 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 COL20A1Q9P218 1284 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 GPR160Q9UJ42 338 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CDV3Q9UKY7 258 aaKnown RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 COL11A1P12107 1806 aaPredicted RBP-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 ABCA4P78363 2273 aa-0.53□□□□□ -2.49
CDKL5-210ENST00000636046 CACNA1IQ9P0X4 2223 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 MED19A0JLT2 244 aaPredicted RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 KLLNB2CW77 178 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF814B7Z6K7 855 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 J3KR12 359 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ERVH48-1M5A8F1 160 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 FSCN2O14926 492 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 VGFO15240 615 aaPredicted RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CLASP2O75122 1294 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CRLF1O75462 422 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 LEFTY1O75610 366 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 KRT33AO76009 404 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ZBTB7AO95365 584 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 IGKV1D-16P01601 117 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 IGKV3-11P04433 115 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 USP17L8P0C7I0 530 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF32P17041 273 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 EIF2AK2P19525 551 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 SDHBP21912 280 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 SCP2P22307 547 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 MZF1P28698 734 aaPredicted RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CDC25BP30305 580 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 PTGS2P35354 604 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 PLCD1P51178 756 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ADPRHP54922 357 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 IRF9Q00978 393 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CDK5R2Q13319 367 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 RBM39Q14498 530 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 SHHQ15465 462 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 LPAL2Q16609 132 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 NKPD1Q17RQ9 610 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 C14orf177Q52M58 125 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 FAM26FQ5R3K3 315 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 DACT2Q5SW24 774 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CAPRIN2Q6IMN6 1127 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 FAM166AQ6J272 317 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 LRP10Q7Z4F1 713 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ARHGAP22Q7Z5H3 698 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ADGRA1Q86SQ6 560 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 RETREG3Q86VR2 466 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 MARCH9Q86YJ5 346 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CBARPQ8N350 705 aaPredicted RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 TMEM52Q8NDY8 209 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 BEND2Q8NDZ0 799 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 FRS2Q8WU20 508 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 PHF10Q8WUB8 498 aaKnown RBP-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms