RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 F5H6K3 240 aa21.83■■□□□ 1.09
CLN6-212ENST00000636020 ALADP13716 330 aa21.83■■□□□ 1.09
CLN6-212ENST00000636020 KLRC3Q07444 240 aa21.83■■□□□ 1.09
CLN6-212ENST00000636020 UBE2ZQ9H832 354 aaPredicted RBP21.83■■□□□ 1.09
CLN6-212ENST00000636020 CTDP1Q9Y5B0 961 aaPredicted RBP21.83■■□□□ 1.09
CLN6-212ENST00000636020 NDUFB10O96000 172 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 RFC2P35250 354 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 LEXMQ3ZCV2 418 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 AACSQ86V21 672 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 CLUAP1Q96AJ1 413 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 Q9Y3F1 56 aa21.82■■□□□ 1.08
CLN6-212ENST00000636020 TNKSO95271 1327 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 SOWAHBA6NEL2 793 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 CSPP1Q1MSJ5 1256 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 IQSEC1Q6DN90 963 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 AMOTL1Q8IY63 956 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.81■■□□□ 1.08
CLN6-212ENST00000636020 KIFC2Q96AC6 838 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 PDGFCQ9NRA1 345 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 NYAP2Q9P242 653 aa21.81■■□□□ 1.08
CLN6-212ENST00000636020 COL4A4P53420 1690 aaPredicted RBP21.8■■□□□ 1.08
CLN6-212ENST00000636020 ASB14A6NK59 587 aa21.8■■□□□ 1.08
CLN6-212ENST00000636020 MBD4O95243 580 aa21.8■■□□□ 1.08
CLN6-212ENST00000636020 SSTR3P32745 418 aaPredicted RBP21.8■■□□□ 1.08
CLN6-212ENST00000636020 OAZ1P54368 228 aa21.8■■□□□ 1.08
CLN6-212ENST00000636020 TMEM63BQ5T3F8 832 aa21.8■■□□□ 1.08
CLN6-212ENST00000636020 TAPT1Q6NXT6 567 aa21.8■■□□□ 1.08
CLN6-212ENST00000636020 TRIOO75962 3097 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 TET1Q8NFU7 2136 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 GOLIM4O00461 696 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 SLFNL1Q499Z3 407 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 TMEM57Q8N5G2 664 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 GDPD5Q8WTR4 605 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 C1orf115Q9H7X2 142 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 HOMER2Q9NSB8 354 aa21.79■■□□□ 1.08
CLN6-212ENST00000636020 LCHNA4D1U4 455 aa21.78■■□□□ 1.08
CLN6-212ENST00000636020 IQCF3P0C7M6 154 aa21.78■■□□□ 1.08
CLN6-212ENST00000636020 IL9P15248 144 aa21.78■■□□□ 1.08
CLN6-212ENST00000636020 FTOQ9C0B1 505 aaKnown RBP eCLIP21.78■■□□□ 1.08
CLN6-212ENST00000636020 A1CFQ9NQ94 594 aaKnown RBP21.78■■□□□ 1.08
CLN6-212ENST00000636020 FEM1BQ9UK73 627 aa21.78■■□□□ 1.08
CLN6-212ENST00000636020 DDX49Q9Y6V7 483 aaKnown RBP21.78■■□□□ 1.08
CLN6-212ENST00000636020 GREB1LQ9C091 1923 aaPredicted RBP21.78■■□□□ 1.08
CLN6-212ENST00000636020 POTEB3A0JP26 581 aa21.77■■□□□ 1.08
CLN6-212ENST00000636020 KCNA5P22460 613 aa21.77■■□□□ 1.08
CLN6-212ENST00000636020 CTR9Q6PD62 1173 aa21.77■■□□□ 1.08
CLN6-212ENST00000636020 POTEBQ6S5H4 581 aa21.77■■□□□ 1.08
CLN6-212ENST00000636020 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
CLN6-212ENST00000636020 ACAD9Q9H845 621 aa21.77■■□□□ 1.08
CLN6-212ENST00000636020 USP34Q70CQ2 3546 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 ZNF318Q5VUA4 2279 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 DCXO43602 365 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 BAIAP3O94812 1187 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 PTCRAQ6ISU1 281 aaPredicted RBP21.76■■□□□ 1.07
CLN6-212ENST00000636020 RETREG2Q8NC44 543 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLN6-212ENST00000636020 DNAJC2Q99543 621 aaKnown RBP21.76■■□□□ 1.07
CLN6-212ENST00000636020 SUGCTQ9HAC7 445 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 COG6Q9Y2V7 657 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 CFAP54Q96N23 3096 aa21.76■■□□□ 1.07
CLN6-212ENST00000636020 GRXCR2A6NFK2 248 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 ADD2P35612 726 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 PURAQ00577 322 aaKnown RBP21.75■■□□□ 1.07
CLN6-212ENST00000636020 EEPD1Q7L9B9 569 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 FBXO16Q8IX29 292 aaPredicted RBP21.75■■□□□ 1.07
CLN6-212ENST00000636020 DDRGK1Q96HY6 314 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 POLR3EQ9NVU0 708 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 CLIP2Q9UDT6 1046 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 ZNF536O15090 1300 aa21.75■■□□□ 1.07
CLN6-212ENST00000636020 PTPRSQ13332 1948 aa21.74■■□□□ 1.07
CLN6-212ENST00000636020 RASA1P20936 1047 aa21.74■■□□□ 1.07
CLN6-212ENST00000636020 KIAA1211Q6ZU35 1233 aa21.74■■□□□ 1.07
CLN6-212ENST00000636020 ERC1Q8IUD2 1116 aa21.74■■□□□ 1.07
CLN6-212ENST00000636020 RNF146Q9NTX7 359 aa21.74■■□□□ 1.07
CLN6-212ENST00000636020 FDX1P10109 184 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 KCNJ6P48051 423 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 ERVK-21P61565 698 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 DUSP28Q4G0W2 176 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 MKL1Q969V6 931 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 IL1RAPL2Q9NP60 686 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 VTA1Q9NP79 307 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
CLN6-212ENST00000636020 IGKV6D-41A0A0C4DH26 115 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 WDR5P61964 334 aaKnown RBP21.72■■□□□ 1.07
CLN6-212ENST00000636020 NBPF20Q3BBV1 942 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 FAM47CQ5HY64 1035 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 TMCO2Q7Z6W1 182 aaPredicted RBP21.72■■□□□ 1.07
CLN6-212ENST00000636020 TGS1Q96RS0 853 aaKnown RBP21.72■■□□□ 1.07
CLN6-212ENST00000636020 MTG1Q9BT17 334 aaPredicted RBP21.72■■□□□ 1.07
CLN6-212ENST00000636020 ZBED2Q9BTP6 218 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 MTUS1Q9ULD2 1270 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 SLC4A4Q9Y6R1 1079 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 SCN10AQ9Y5Y9 1956 aa21.72■■□□□ 1.07
CLN6-212ENST00000636020 MYL3P08590 195 aa21.71■■□□□ 1.07
CLN6-212ENST00000636020 BFSP2Q13515 415 aa21.71■■□□□ 1.07
CLN6-212ENST00000636020 TKFCQ3LXA3 575 aa21.71■■□□□ 1.07
CLN6-212ENST00000636020 PUS10Q3MIT2 529 aaKnown RBP21.71■■□□□ 1.07
CLN6-212ENST00000636020 MORC4Q8TE76 937 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms