RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 A0A0C4DFX4 3053 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 PLA2G6O60733 806 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-214ENST00000635682 PDHBP11177 359 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 NOVP48745 357 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 OAZ1P54368 228 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 FGD1P98174 961 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 SHHQ15465 462 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 RNF180Q86T96 592 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 FBXO40Q9UH90 709 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 MCM3APO60318 1980 aa17.26■□□□□ 0.35
HSPG2-214ENST00000635682 PARP1P09874 1014 aaKnown RBP17.25■□□□□ 0.35
HSPG2-214ENST00000635682 AKR1A1P14550 325 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 CCDC174Q6PII3 467 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 TMTC2Q8N394 836 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 SLC38A10Q9HBR0 1119 aa17.25■□□□□ 0.35
HSPG2-214ENST00000635682 ZHX1Q9UKY1 873 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-214ENST00000635682 DNAJC25-GNG10A0A024R161 153 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 POTEB2H3BUK9 544 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 PRC1O43663 620 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
HSPG2-214ENST00000635682 ZNF543Q08ER8 600 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 SYNE3Q6ZMZ3 975 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 ANKRD35Q8N283 1001 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 PRR12Q9ULL5 1215 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
HSPG2-214ENST00000635682 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-214ENST00000635682 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 DLL1O00548 723 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 PQBP1O60828 265 aaKnown RBP17.23■□□□□ 0.35
HSPG2-214ENST00000635682 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 ITGB8P26012 769 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 SLC16A2P36021 539 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-214ENST00000635682 TKFCQ3LXA3 575 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 CHST13Q8NET6 341 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
HSPG2-214ENST00000635682 SYNGAP1Q96PV0 1343 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 MYADML2A6NDP7 307 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 ALAS1P13196 640 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 PSMA5P28066 241 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 KCNA10Q16322 511 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 MB21D2Q8IYB1 491 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-214ENST00000635682 MSL3Q8N5Y2 521 aaKnown RBP17.22■□□□□ 0.35
HSPG2-214ENST00000635682 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-214ENST00000635682 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 FGD4Q96M96 766 aa17.22■□□□□ 0.35
HSPG2-214ENST00000635682 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-214ENST00000635682 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
HSPG2-214ENST00000635682 CLTBP09497 229 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 KIF5BP33176 963 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 ACLYP53396 1101 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 SNAP25P60880 206 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 ACVR2BQ13705 512 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 GUCD1Q96NT3 240 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 ACAD9Q9H845 621 aa17.21■□□□□ 0.35
HSPG2-214ENST00000635682 ADCY6O43306 1168 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 CALM1P0DP23 149 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 CALM2P0DP24 149 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 CALM3P0DP25 149 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 EPHB4P54760 987 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 SEC23AQ15436 765 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 FAM109BQ6ICB4 259 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-214ENST00000635682 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 RASGRP2Q7LDG7 609 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-214ENST00000635682 KLHDC9Q8NEP7 349 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
HSPG2-214ENST00000635682 STARD7Q9NQZ5 370 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 RNF146Q9NTX7 359 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 TMEM39AQ9NV64 488 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
HSPG2-214ENST00000635682 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms